Detailed information NTG0514769

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: I8T81_RS19035
• Genome accession: NZ_CP065820
• Coordinates: 3709663..3710523 (+)
• Length: 286 a.a.
• NCBI ID: WP_198071716.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain S21
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3704663..3715523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I8T81_RS17100 (I8T81_17100)	secG	3705271..3705600 (-)	330	WP_002156913.1	preprotein translocase subunit SecG	-
I8T81_RS17105 (I8T81_17105)	tpiA	3705613..3706407 (-)	795	WP_198071714.1	triose-phosphate isomerase	-
I8T81_RS17110 (I8T81_17110)	pilB	3706697..3708409 (+)	1713	WP_198071715.1	type IV-A pilus assembly ATPase PilB	Machinery gene
I8T81_RS17115 (I8T81_17115)	pilC	3708437..3709663 (+)	1227	WP_086496648.1	type II secretion system F family protein	Machinery gene
I8T81_RS19035 (I8T81_17120)	pilD	3709663..3710523 (+)	861	WP_198071716.1	A24 family peptidase	Machinery gene
I8T81_RS17125 (I8T81_17125)	coaE	3710525..3711121 (+)	597	WP_198071717.1	dephospho-CoA kinase	-
I8T81_RS17130 (I8T81_17130)	-	3711124..3712032 (-)	909	WP_198071718.1	DMT family transporter	-
I8T81_RS17135 (I8T81_17135)	rlmB	3712068..3712817 (-)	750	WP_198071719.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
I8T81_RS17140 (I8T81_17140)	-	3712920..3713246 (-)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
I8T81_RS19065	-	3713353..3713758 (-)	406	Protein_3363	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32221.72 Da
• Isoelectric Point: 7.5355

>NTDB_id=514769 I8T81_RS19035 WP_198071716.1 3709663..3710523(+) (pilD) [Acinetobacter seifertii strain S21]
MQDIIAYFIQNLTALYIAVALLSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPKCHQP
IRWYQNIPVISWLMLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGPTIQMLWGLVLTWVLITLTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTAPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=514769 I8T81_RS19035 WP_198071716.1 3709663..3710523(+) (pilD) [Acinetobacter seifertii strain S21]
ATGCAAGACATCATTGCTTATTTTATTCAAAACTTAACTGCACTTTATATTGCAGTTGCACTATTGAGCCTGTGTATTGG
TAGCTTTTTGAATGTGGTGATTTATCGCACCCCCAAAATGATGGAACAAGATTGGCAGCAAGAATGTCAAATGTTACTCA
ATCCTGAACAACCAATCATTGATCATGAAAAGCTAACATTAAGCAAACCTGCTTCATCATGTCCAAAGTGCCATCAACCG
ATTCGTTGGTATCAAAATATCCCAGTCATAAGCTGGTTGATGTTAAGAGGAAAATGTGGTCATTGCCAACATCCGATTAG
CATTCGTTATCCAGCAATTGAACTACTCACCATGTTATGTTCATTGGTGGTGGTTATGGTGTTTGGCCCGACCATACAAA
TGCTTTGGGGACTCGTCCTGACTTGGGTTTTAATTACCCTCACCTTTATAGACTTTGATACACAACTTTTGCCTGATCGC
TTTACCCTGCCTTTAGCAGCACTCGGCTTAGGCATTAACACCTTTAATATTTATACCGCGCCTAACTCAGCTATTTGGGG
TTATTTAATCGGCTTTTTATGCCTATGGATTGTGTATTACTTATTTAAAGTGATTACTGGCAAAGAAGGTATGGGCTACG
GTGACTTTAAATTGCTTGCCGCATTAGGCGCATGGATGGGACCATTGATGCTGCCATTAATTGTGTTATTGTCATCTTTA
TTAGGTGCAATCATTGGCATCATTTTATTAAAGTTAAGAAATGACAATCAGCCTTTTGCTTTTGGACCATATATTGCCAT
TGCGGGCTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAGATTTATTTAGGAGGTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-128)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	97.203	100	0.972
pilD	Acinetobacter baumannii D1279779	96.853	100	0.969
pilD	Vibrio cholerae strain A1552	53.114	95.455	0.507
pilD	Vibrio campbellii strain DS40M4	52.03	94.755	0.493
pilD	Neisseria gonorrhoeae MS11	48.485	92.308	0.448