Detailed information NTG0514674

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: KX728_RS09200
• Genome accession: NZ_CP079724
• Coordinates: 1903238..1904335 (+)
• Length: 365 a.a.
• NCBI ID: WP_215804206.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain 34
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1898238..1909335

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KX728_RS09175 (KX728_09170)	pgsA	1898763..1899308 (-)	546	WP_049484949.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
KX728_RS09180 (KX728_09175)	rodZ	1899319..1900140 (-)	822	WP_215804209.1	cytoskeleton protein RodZ	-
KX728_RS09185 (KX728_09180)	yfmH	1900176..1901459 (-)	1284	WP_215804208.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
KX728_RS09190 (KX728_09185)	yfmF	1901456..1902706 (-)	1251	WP_215804207.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
KX728_RS09195 (KX728_09190)	yaaA	1902867..1903235 (+)	369	WP_000455876.1	S4 domain-containing protein YaaA	-
KX728_RS09200 (KX728_09195)	recF	1903238..1904335 (+)	1098	WP_215804206.1	DNA replication/repair protein RecF	Machinery gene
KX728_RS09205 (KX728_09200)	guaB	1904388..1905866 (-)	1479	WP_000073416.1	IMP dehydrogenase	-
KX728_RS09210 (KX728_09205)	trpS	1906029..1907054 (-)	1026	WP_215804205.1	tryptophan--tRNA ligase	-
KX728_RS09215 (KX728_09210)	-	1907250..1908872 (+)	1623	WP_000958793.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42009.16 Da
• Isoelectric Point: 9.0501

>NTDB_id=514674 KX728_RS09200 WP_215804206.1 1903238..1904335(+) (recF) [Streptococcus oralis strain 34]
MWLQHLTIKTFRNYKEAKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKNLIHFDDEQLHLSGLLQKKTSS
IPLEIDLTPKGRVTKVNHLKQARLSDYIGHMNVVLFAPEDLQLIKGAPSVRRKFIDIELGQIKPIYLSDLSNYNHILKQR
NTYLKSSQKIDETFLSVLDDQLIDYGCRVIKHRIKFIKDLEKFGQKKHLEISNKLEELSISYQSSVNFTDEEQLTSSFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINAMDASFGSQGQHRSLVLSIKLAEIELMESITNESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFNIQNGKISVNQH

Nucleotide

• Length: 1098 bp

>NTDB_id=514674 KX728_RS09200 WP_215804206.1 1903238..1904335(+) (recF) [Streptococcus oralis strain 34]
ATGTGGCTCCAACATTTAACAATTAAAACCTTTCGAAACTACAAAGAGGCGAAAATTGATTTCAATCCAAAATTAAATGT
CTTTCTAGGTCAAAATGCACAAGGAAAAACCAATATTCTAGAGGCAATCTATTTCTTGGCCTTGACACGTAGTCATCGGA
CTCGTACAGATAAAAATCTCATTCATTTTGATGACGAGCAACTTCATCTTTCTGGCTTGCTACAGAAAAAAACAAGCTCT
ATCCCTCTAGAAATTGATTTAACACCAAAAGGGCGTGTGACTAAGGTCAATCACTTAAAACAAGCGCGCCTATCAGACTA
TATTGGACATATGAATGTTGTCCTCTTCGCACCTGAAGATCTCCAGCTAATTAAAGGAGCACCTTCTGTCCGTCGAAAGT
TTATAGACATTGAACTGGGACAAATTAAACCAATCTACTTGTCAGACTTGTCAAACTATAACCATATACTCAAGCAAAGA
AATACTTATCTAAAATCCAGCCAGAAGATTGATGAAACATTTCTGTCAGTCTTAGATGATCAGTTAATAGATTATGGTTG
TCGCGTTATAAAGCATCGGATAAAATTCATTAAAGACTTAGAGAAATTTGGCCAAAAAAAACACTTAGAAATTTCAAATA
AATTAGAAGAACTGTCAATATCTTATCAATCATCTGTCAACTTCACTGATGAAGAACAGCTAACAAGTTCTTTTAAAATT
GCTTTGGAGAAAAGCAGATCCAGAGACTTATTTAAAAAGAATACTGGAGTTGGCCCTCATCGAGATGATATTTCTTTTTA
TATCAATGCTATGGATGCTAGTTTTGGAAGCCAAGGTCAACATCGTAGTCTTGTGCTTTCTATCAAACTAGCAGAGATTG
AGCTAATGGAAAGTATTACAAACGAGTCTCCGATACTACTGCTTGATGATGTTATGAGCGAACTTGACAATACACGGCAA
CTAAAATTACTAGAAACCATTTCTCAATCTATCCAAACCTTTATTACAACAACAAGTTTAGACCACTTACAAAACTTACC
AGAAAACCTTAGTATTTTTAATATTCAAAATGGTAAAATTTCTGTAAATCAACATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	89.532	99.452	0.89
recF	Bacillus subtilis subsp. subtilis str. 168	45.109	100	0.455