Detailed information NTG0514519

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: I8N73_RS02100
• Genome accession: NZ_CP065791
• Coordinates: 445891..447039 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LBUM279
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 440891..452039

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I8N73_RS02080 (I8N73_02080)	-	441288..441971 (-)	684	WP_094032071.1	ABC transporter ATP-binding protein	-
I8N73_RS02085 (I8N73_02085)	-	441986..443422 (-)	1437	WP_199022337.1	ABC transporter permease	-
I8N73_RS02090 (I8N73_02090)	-	443635..444318 (+)	684	WP_007410267.1	response regulator transcription factor	-
I8N73_RS02095 (I8N73_02095)	-	444305..445738 (+)	1434	WP_179288762.1	sensor histidine kinase	-
I8N73_RS02100 (I8N73_02100)	rapC	445891..447039 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
I8N73_RS02105 (I8N73_02105)	phrC	447023..447142 (+)	120	WP_064115825.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
I8N73_RS02110 (I8N73_02110)	-	447291..447401 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
I8N73_RS02115 (I8N73_02115)	-	447481..448845 (-)	1365	WP_199022338.1	aspartate kinase	-
I8N73_RS02120 (I8N73_02120)	ceuB	449259..450212 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
I8N73_RS02125 (I8N73_02125)	-	450202..451149 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
I8N73_RS02130 (I8N73_02130)	-	451143..451901 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=514519 I8N73_RS02100 WP_007410270.1 445891..447039(+) (rapC) [Bacillus velezensis strain LBUM279]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=514519 I8N73_RS02100 WP_007410270.1 445891..447039(+) (rapC) [Bacillus velezensis strain LBUM279]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568