Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LLNZ_RS12085 Genome accession   NC_017949
Coordinates   2357058..2358344 (-) Length   428 a.a.
NCBI ID   WP_011836052.1    Uniprot ID   A2RNT3
Organism   Lactococcus cremoris subsp. cremoris NZ9000     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2352058..2363344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLNZ_RS14065 - 2352481..2353074 (-) 594 Protein_2352 PolC-type DNA polymerase III N-terminal domain-containing protein -
  LLNZ_RS12070 (LLNZ_12455) - 2353248..2353784 (-) 537 WP_011836050.1 hypothetical protein -
  LLNZ_RS14010 - 2353791..2354270 (-) 480 WP_228764279.1 hypothetical protein -
  LLNZ_RS12075 - 2354191..2355123 (-) 933 WP_228764280.1 FAD/NAD(P)-binding oxidoreductase -
  LLNZ_RS12080 (LLNZ_12470) - 2355138..2356988 (-) 1851 WP_011836051.1 proline--tRNA ligase -
  LLNZ_RS12085 (LLNZ_12475) eeP 2357058..2358344 (-) 1287 WP_011836052.1 RIP metalloprotease RseP Regulator
  LLNZ_RS12090 (LLNZ_12480) - 2358363..2359166 (-) 804 WP_011836053.1 phosphatidate cytidylyltransferase -
  LLNZ_RS12095 (LLNZ_12485) - 2359166..2359900 (-) 735 WP_011836054.1 isoprenyl transferase -
  LLNZ_RS12100 (LLNZ_12490) yajC 2360251..2360583 (-) 333 WP_011836055.1 preprotein translocase subunit YajC -
  LLNZ_RS12105 (LLNZ_12495) - 2360678..2361376 (-) 699 WP_011836056.1 DNA alkylation repair protein -
  LLNZ_RS12110 (LLNZ_12500) rlmH 2361394..2361873 (-) 480 WP_011836057.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 46354.86 Da        Isoelectric Point: 6.7736

>NTDB_id=51441 LLNZ_RS12085 WP_011836052.1 2357058..2358344(-) (eeP) [Lactococcus cremoris subsp. cremoris NZ9000]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEISRSGKSETLAVTPKKMDGSYRVGIMKSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=51441 LLNZ_RS12085 WP_011836052.1 2357058..2358344(-) (eeP) [Lactococcus cremoris subsp. cremoris NZ9000]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGCCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGGATTTTACCACTTGGGGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGCTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGTTTAAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TAGCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGAAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTGTGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(217-279)

Peptidase family M50 (Peptidase_M50)

(7-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RNT3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.148

100

0.565
  eeP Streptococcus thermophilus LMD-9

55.916

100

0.563

Multiple sequence alignment