Detailed information NTG0514334

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: KWY62_RS10165
• Genome accession: NZ_CP079193
• Coordinates: 2114599..2115693 (+)
• Length: 364 a.a.
• NCBI ID: WP_044673842.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID41570
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2109599..2120693

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KWY62_RS10140 (KWY62_10140)	pgsA	2110118..2110657 (-)	540	WP_014736596.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
KWY62_RS10145 (KWY62_10145)	rodZ	2110667..2111524 (-)	858	WP_024400063.1	cytoskeleton protein RodZ	-
KWY62_RS10150 (KWY62_10150)	yfmH	2111606..2112889 (-)	1284	WP_044673836.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
KWY62_RS10155 (KWY62_10155)	yfmF	2112886..2114139 (-)	1254	WP_044673839.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
KWY62_RS10160 (KWY62_10160)	yaaA	2114213..2114596 (+)	384	WP_044673841.1	S4 domain-containing protein YaaA	-
KWY62_RS10165 (KWY62_10165)	recF	2114599..2115693 (+)	1095	WP_044673842.1	DNA replication/repair protein RecF	Machinery gene
KWY62_RS10170 (KWY62_10170)	guaB	2115962..2117443 (-)	1482	WP_015647590.1	IMP dehydrogenase	-
KWY62_RS10175 (KWY62_10175)	trpS	2117675..2118700 (-)	1026	WP_014736602.1	tryptophan--tRNA ligase	-
KWY62_RS10180 (KWY62_10180)	-	2119055..2119927 (+)	873	WP_015647591.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42216.36 Da
• Isoelectric Point: 7.4360

>NTDB_id=514334 KWY62_RS10165 WP_044673842.1 2114599..2115693(+) (recF) [Streptococcus suis strain ID41570]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRINFLKKLEEFGNRKVQEISGNREELTIEYQTSIKLTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=514334 KWY62_RS10165 WP_044673842.1 2114599..2115693(+) (recF) [Streptococcus suis strain ID41570]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TTATCGATGTCGAGCTAGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTAACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAAACCTCAATCAAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTAGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	69.806	99.176	0.692
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442