Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   LLNZ_RS09890 Genome accession   NC_017949
Coordinates   1960209..1960910 (-) Length   233 a.a.
NCBI ID   WP_011676802.1    Uniprot ID   A0A0M2ZUZ8
Organism   Lactococcus cremoris subsp. cremoris NZ9000     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1955209..1965910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLNZ_RS09870 (LLNZ_10190) sufC 1956433..1957203 (-) 771 WP_011835712.1 Fe-S cluster assembly ATPase SufC -
  LLNZ_RS09880 (LLNZ_10200) - 1957424..1958808 (+) 1385 WP_164845598.1 IS3 family transposase -
  LLNZ_RS09885 (LLNZ_10205) - 1958881..1960206 (-) 1326 WP_011835713.1 MraY family glycosyltransferase -
  LLNZ_RS09890 (LLNZ_10210) mecA 1960209..1960910 (-) 702 WP_011676802.1 adaptor protein MecA Regulator
  LLNZ_RS09895 (LLNZ_10215) - 1961040..1961774 (-) 735 WP_011835714.1 amino acid ABC transporter ATP-binding protein -
  LLNZ_RS09900 (LLNZ_10220) - 1961774..1962460 (-) 687 WP_011835715.1 amino acid ABC transporter permease -
  LLNZ_RS09905 (LLNZ_10225) - 1962607..1963515 (-) 909 WP_011835716.1 diacylglycerol kinase family protein -

Sequence


Protein


Download         Length: 233 a.a.        Molecular weight: 27046.46 Da        Isoelectric Point: 4.1802

>NTDB_id=51425 LLNZ_RS09890 WP_011676802.1 1960209..1960910(-) (mecA) [Lactococcus cremoris subsp. cremoris NZ9000]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGAKKEEAEHEPDFIYYSIRYDDMMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKAKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLITTRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=51425 LLNZ_RS09890 WP_011676802.1 1960209..1960910(-) (mecA) [Lactococcus cremoris subsp. cremoris NZ9000]
ATGAAGTATGAGGATATAAATGAAAACACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAGTT
ATCTGACTTTTTTGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTAGTTGATGAACTTGGCTTAGAAAATCGTT
TTGGAAATGTAGGGATGTTAACTTTCCAAATTCAACCCTTCCCACAAGGCGTCCATATGATTGTTCATGAAGAAGCAATG
TTGGGTGAAGGCGGAGAGATTCCAGATGATCCTGAAGAATTTGAAGAATTAATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGACTTGGTTTACCAGGGGCTAAAAAAGAAG
AAGCCGAACATGAGCCAGACTTTATATACTACTCTATTCGTTATGATGACATGATGTCTGTCTTGACTGGAATAAAAAAT
GTGAAATTCGCAGATGAAGAGTCAGAATTTTATCGTTATGATGGTAATTTTTATCTTGTTGTTTTAGATAATCAAAAAGC
AAAAGGTAAAATGCATGTTGAAAGCACACGTTCACGGATGATGGAATATGGTGAAGCGACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGCCTAATCACAACGCGTGCTTTAGACGTTCTTAGAAAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0M2ZUZ8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

100

100

1

  mecA Lactococcus lactis subsp. lactis strain DGCC12653

96.567

100

0.966


Multiple sequence alignment