Detailed information NTG0513932

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: I6G32_RS03415
• Genome accession: NZ_CP065750
• Coordinates: 743076..745301 (-)
• Length: 741 a.a.
• NCBI ID: WP_013983261.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain FDAARGOS_875
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 738076..750301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G32_RS03380 (I6G32_03380)	murB	738466..739485 (-)	1020	WP_013983255.1	UDP-N-acetylmuramate dehydrogenase	-
I6G32_RS03385 (I6G32_03385)	-	739482..739949 (-)	468	WP_013983256.1	low molecular weight protein-tyrosine-phosphatase	-
I6G32_RS03390 (I6G32_03390)	kdsB	739951..740715 (-)	765	WP_013983257.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I6G32_RS03395 (I6G32_03395)	-	740712..740897 (-)	186	WP_011913743.1	Trm112 family protein	-
I6G32_RS03400 (I6G32_03400)	lpxK	740943..741947 (-)	1005	WP_013983258.1	tetraacyldisaccharide 4'-kinase	-
I6G32_RS03405 (I6G32_03405)	-	741947..742375 (-)	429	WP_013983259.1	ExbD/TolR family protein	-
I6G32_RS03410 (I6G32_03410)	-	742372..743004 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
I6G32_RS03415 (I6G32_03415)	comA	743076..745301 (-)	2226	WP_013983261.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
I6G32_RS03420 (I6G32_03420)	-	745447..745962 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
I6G32_RS03425 (I6G32_03425)	-	745975..747219 (-)	1245	WP_026012454.1	lipoprotein-releasing ABC transporter permease subunit	-
I6G32_RS03430 (I6G32_03430)	lolD	747219..747917 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
I6G32_RS03435 (I6G32_03435)	-	747925..749172 (-)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
I6G32_RS03440 (I6G32_03440)	-	749205..749840 (+)	636	WP_013983265.1	PilZ domain-containing protein	-
I6G32_RS03445 (I6G32_03445)	-	749844..750152 (+)	309	WP_011913753.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80961.55 Da
• Isoelectric Point: 10.2466

>NTDB_id=513932 I6G32_RS03415 WP_013983261.1 743076..745301(-) (comA) [Stutzerimonas stutzeri strain FDAARGOS_875]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGFFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAA
GTIKAGERLTASAASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLF
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LAFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQHSCVLQIEANGERILLTGDIDQA
AERAWLASGQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLEILDIRAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=513932 I6G32_RS03415 WP_013983261.1 743076..745301(-) (comA) [Stutzerimonas stutzeri strain FDAARGOS_875]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTTTTTCTGCTGGGTTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGTACGTTTTGGATCGAG
GGACGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCGCG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGGCGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTACCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGTGTCCTGCTGTTC
GATCCCCTGGTCACATTGCAGCCGGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCCTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTCGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTGTTGCCG
CTGGCGTTCCCGCCTCGTGTCGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTGGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGATCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCACTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGGACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGACACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGATCCTCGATATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.367	96.356	0.649
comA	Ralstonia pseudosolanacearum GMI1000	36.889	100	0.387