Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV/pilI   Type   Regulator
Locus tag   KWY96_RS05510 Genome accession   NZ_CP078116
Coordinates   1067539..1068156 (-) Length   205 a.a.
NCBI ID   WP_010359918.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain 88G285     
Function   repress natural transformation; antagonize ComP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1062539..1073156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KWY96_RS05475 (KWY96_05475) dapC 1062544..1063731 (-) 1188 WP_003687924.1 succinyldiaminopimelate transaminase -
  KWY96_RS05480 (KWY96_05480) dut 1063809..1064261 (-) 453 WP_003687923.1 dUTP diphosphatase -
  KWY96_RS05485 (KWY96_05485) - 1064427..1065134 (+) 708 Protein_1071 AzlC family ABC transporter permease -
  KWY96_RS05490 (KWY96_05490) - 1065131..1065439 (+) 309 WP_010951048.1 AzlD family protein -
  KWY96_RS05495 (KWY96_05495) pilL 1065509..1065982 (-) 474 WP_218422965.1 PilX family type IV pilin Machinery gene
  KWY96_RS05500 (KWY96_05500) pilK 1065984..1066595 (-) 612 WP_218422958.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  KWY96_RS05505 (KWY96_05505) pilJ 1066574..1067542 (-) 969 WP_010359920.1 PilW family protein Machinery gene
  KWY96_RS05510 (KWY96_05510) pilV/pilI 1067539..1068156 (-) 618 WP_010359918.1 type IV pilus modification protein PilV Regulator
  KWY96_RS05515 (KWY96_05515) pilH 1068188..1068850 (-) 663 WP_025455984.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  KWY96_RS05520 (KWY96_05520) dnaB 1069158..1070564 (-) 1407 WP_003701055.1 replicative DNA helicase -
  KWY96_RS05525 (KWY96_05525) - 1070728..1071309 (+) 582 WP_003698180.1 superoxide dismutase -
  KWY96_RS05530 (KWY96_05530) - 1071539..1072048 (-) 510 WP_218422959.1 isoprenylcysteine carboxyl methyltransferase family protein -
  KWY96_RS05535 (KWY96_05535) - 1072375..1072707 (-) 333 WP_003687908.1 hypothetical protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22132.98 Da        Isoelectric Point: 4.9758

>NTDB_id=513674 KWY96_RS05510 WP_010359918.1 1067539..1068156(-) (pilV/pilI) [Neisseria gonorrhoeae strain 88G285]
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYTGPYTPTPSGGDFKFNNNNLISKKDLAKAQLDRFGYELKQALPDAVAIHHAVCKDSSGDAPTLSDSGDFSSNCDDK
ANGDTLIKVLWVNDSAGDSDISRTNLGVSGGNIVYTYQARVGGRE

Nucleotide


Download         Length: 618 bp        

>NTDB_id=513674 KWY96_RS05510 WP_010359918.1 1067539..1068156(-) (pilV/pilI) [Neisseria gonorrhoeae strain 88G285]
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGTTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGCTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACACGGGGCCGTACACCCCCACTCCCTCTGGCGGCGATTTCAAGTTTAATAATAATAATTTGATAAGTAA
GAAGGATTTGGCAAAAGCCCAGTTGGACAGGTTCGGTTATGAATTGAAACAAGCCTTGCCGGATGCGGTAGCTATTCATC
ACGCCGTCTGCAAGGATTCGTCGGGTGACGCGCCGACATTGTCCGACAGCGGTGATTTTTCTTCAAATTGCGACGATAAG
GCAAACGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGG
GGTGAGCGGCGGCAATATCGTATATACTTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV/pilI Neisseria gonorrhoeae MS11

90.732

100

0.907
  pilV Neisseria meningitidis 8013

82.297

100

0.839