Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | I6G28_RS07835 | Genome accession | NZ_CP065726 |
| Coordinates | 1576485..1577084 (+) | Length | 199 a.a. |
| NCBI ID | WP_108043408.1 | Uniprot ID | A0A7T3EVG8 |
| Organism | Neisseria cinerea strain FDAARGOS_871 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1571485..1582084
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G28_RS07820 (I6G28_07820) | yihA | 1572075..1572704 (+) | 630 | WP_039854198.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| I6G28_RS07825 (I6G28_07825) | - | 1572824..1575220 (-) | 2397 | WP_111726310.1 | penicillin-binding protein 1A | - |
| I6G28_RS07830 (I6G28_07830) | pilM | 1575373..1576482 (+) | 1110 | WP_107959811.1 | type IV pilus biogenesis protein PilM | - |
| I6G28_RS07835 (I6G28_07835) | pilN | 1576485..1577084 (+) | 600 | WP_108043408.1 | PilN domain-containing protein | Machinery gene |
| I6G28_RS07840 (I6G28_07840) | - | 1577085..1577753 (+) | 669 | WP_111726308.1 | type 4a pilus biogenesis protein PilO | - |
| I6G28_RS07845 (I6G28_07845) | pilP | 1577771..1578322 (+) | 552 | WP_108043410.1 | pilus assembly protein PilP | Machinery gene |
| I6G28_RS09385 | - | 1578340..1578741 (+) | 402 | Protein_1508 | AMIN domain-containing protein | - |
| I6G28_RS07850 (I6G28_07850) | - | 1578781..1580535 (+) | 1755 | Protein_1509 | type IV pilus secretin PilQ | - |
| I6G28_RS07855 (I6G28_07855) | - | 1580688..1581200 (+) | 513 | WP_111726304.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22652.83 Da Isoelectric Point: 8.3192
>NTDB_id=513596 I6G28_RS07835 WP_108043408.1 1576485..1577084(+) (pilN) [Neisseria cinerea strain FDAARGOS_871]
MNNLIKINLLPYREEINRRKQQQFKTLMYGAVLIGFASIAGAYLFIDNMTNNQLERNTLLETSIAHLDSELTEIQKLKQE
KDAFLLKKNKIEELQLKRLQAAKILDSLNETIPDNTYLTSLEAVTADSYRLNGRTSSDNRVANMMRAMPNTGIFNQPELL
SIKKNNSYQEFTLQATLNPIVKASETAKNPAPENTQETN
MNNLIKINLLPYREEINRRKQQQFKTLMYGAVLIGFASIAGAYLFIDNMTNNQLERNTLLETSIAHLDSELTEIQKLKQE
KDAFLLKKNKIEELQLKRLQAAKILDSLNETIPDNTYLTSLEAVTADSYRLNGRTSSDNRVANMMRAMPNTGIFNQPELL
SIKKNNSYQEFTLQATLNPIVKASETAKNPAPENTQETN
Nucleotide
Download Length: 600 bp
>NTDB_id=513596 I6G28_RS07835 WP_108043408.1 1576485..1577084(+) (pilN) [Neisseria cinerea strain FDAARGOS_871]
ATGAATAATCTAATTAAAATTAACCTTCTTCCCTACAGGGAGGAAATCAACAGGCGTAAACAGCAACAATTCAAAACACT
TATGTATGGTGCCGTATTAATTGGCTTCGCTTCCATTGCGGGGGCTTACCTGTTTATTGACAACATGACCAATAACCAGC
TGGAGAGGAATACCCTTCTAGAAACCTCTATCGCGCACTTAGACAGTGAATTGACTGAAATCCAAAAACTAAAACAAGAG
AAAGATGCTTTCCTGCTTAAGAAAAATAAAATTGAGGAGCTTCAACTCAAACGCCTCCAAGCAGCAAAAATCCTTGACAG
TCTAAACGAAACCATCCCTGACAATACCTATCTGACTTCACTGGAGGCCGTCACTGCCGACTCTTACCGACTGAACGGCA
GAACGTCCAGTGACAACCGTGTTGCCAATATGATGAGGGCTATGCCGAATACAGGTATATTTAACCAACCGGAATTGTTA
AGTATTAAGAAAAACAATTCATACCAAGAATTTACTCTGCAAGCAACATTAAACCCCATCGTAAAGGCTTCTGAGACTGC
AAAGAACCCTGCTCCGGAAAATACACAGGAGACAAACTAA
ATGAATAATCTAATTAAAATTAACCTTCTTCCCTACAGGGAGGAAATCAACAGGCGTAAACAGCAACAATTCAAAACACT
TATGTATGGTGCCGTATTAATTGGCTTCGCTTCCATTGCGGGGGCTTACCTGTTTATTGACAACATGACCAATAACCAGC
TGGAGAGGAATACCCTTCTAGAAACCTCTATCGCGCACTTAGACAGTGAATTGACTGAAATCCAAAAACTAAAACAAGAG
AAAGATGCTTTCCTGCTTAAGAAAAATAAAATTGAGGAGCTTCAACTCAAACGCCTCCAAGCAGCAAAAATCCTTGACAG
TCTAAACGAAACCATCCCTGACAATACCTATCTGACTTCACTGGAGGCCGTCACTGCCGACTCTTACCGACTGAACGGCA
GAACGTCCAGTGACAACCGTGTTGCCAATATGATGAGGGCTATGCCGAATACAGGTATATTTAACCAACCGGAATTGTTA
AGTATTAAGAAAAACAATTCATACCAAGAATTTACTCTGCAAGCAACATTAAACCCCATCGTAAAGGCTTCTGAGACTGC
AAAGAACCCTGCTCCGGAAAATACACAGGAGACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
84.422 |
100 |
0.844 |