Detailed information    

insolico Bioinformatically predicted

Overview

Name   tpc   Type   Machinery gene
Locus tag   I6G28_RS06915 Genome accession   NZ_CP065726
Coordinates   1385814..1386845 (+) Length   343 a.a.
NCBI ID   WP_111726504.1    Uniprot ID   A0A7T3ES87
Organism   Neisseria cinerea strain FDAARGOS_871     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context

Location: 1380814..1391845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G28_RS06890 (I6G28_06890) rsmA 1381932..1382717 (+) 786 WP_111726506.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  I6G28_RS06895 (I6G28_06895) - 1382890..1383618 (+) 729 WP_002240396.1 amino acid ABC transporter ATP-binding protein -
  I6G28_RS06900 (I6G28_06900) - 1383687..1384046 (+) 360 WP_107996862.1 hypothetical protein -
  I6G28_RS06905 (I6G28_06905) - 1384051..1384497 (+) 447 WP_107996861.1 protein YgfX -
  I6G28_RS06910 (I6G28_06910) folC 1384527..1385801 (+) 1275 WP_107960045.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  I6G28_RS06915 (I6G28_06915) tpc 1385814..1386845 (+) 1032 WP_111726504.1 cell division protein FtsN Machinery gene
  I6G28_RS06920 (I6G28_06920) - 1386838..1387335 (+) 498 WP_108043262.1 CvpA family protein -
  I6G28_RS06925 (I6G28_06925) purF 1387543..1389087 (+) 1545 WP_111726503.1 amidophosphoribosyltransferase -
  I6G28_RS06930 (I6G28_06930) greB 1389187..1389678 (+) 492 WP_003675566.1 transcription elongation factor GreB -
  I6G28_RS06935 (I6G28_06935) - 1389737..1390363 (+) 627 WP_111726501.1 phosphoribosylanthranilate isomerase -

Sequence

Protein


Download         Length: 343 a.a.        Molecular weight: 36829.93 Da        Isoelectric Point: 8.8213

>NTDB_id=513593 I6G28_RS06915 WP_111726504.1 1385814..1386845(+) (tpc) [Neisseria cinerea strain FDAARGOS_871]
MSENKQNEVLTGYEQLKRRNRRRLVTASCLVAASCLLLAAALSSDPAENPPAAPTDETGSVENQAASTVQTPTLKSASEG
VEPAADKPQDLAGEEQAPAADNGISEPEDVGAPLVIINDRLDDSNIKGLEASEKLQQEEAAQTAQAEAKQRAAEKAQATV
DNKDTAEKPKQAAESKPQKTERAAESKPKTKEPAQKTADKVSEKPKTLPEKSKSDSTKSDKAVKEPKKSDKAESKKPVEK
EGSDGKKHETASKADKAKTAEKEKSEKSGKKSAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKN
ARDAERDLNKLRVHGIAGQVTNE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=513593 I6G28_RS06915 WP_111726504.1 1385814..1386845(+) (tpc) [Neisseria cinerea strain FDAARGOS_871]
ATGTCCGAAAACAAACAAAACGAAGTCCTGACCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGCTGCCTGGTTGCCGCCTCCTGCCTGCTGCTGGCGGCCGCCCTCAGTTCCGATCCTGCCGAAAATCCCCCTGCCGCAC
CGACTGACGAAACAGGCAGCGTGGAAAACCAAGCGGCAAGCACGGTACAAACCCCGACCTTAAAATCCGCCTCAGAAGGT
GTTGAACCTGCCGCCGACAAACCTCAAGACCTGGCCGGTGAAGAACAAGCACCTGCCGCCGACAACGGAATCAGCGAACC
TGAAGACGTAGGCGCACCATTGGTCATCATCAACGACCGACTCGACGACAGCAATATCAAAGGCTTGGAAGCATCCGAAA
AACTACAACAGGAAGAAGCTGCCCAAACCGCACAGGCAGAGGCAAAACAACGCGCAGCCGAAAAAGCGCAGGCAACGGTT
GACAACAAAGATACGGCTGAAAAACCGAAACAGGCAGCCGAATCCAAACCGCAAAAAACGGAACGCGCAGCCGAATCCAA
ACCCAAAACCAAAGAGCCGGCACAAAAAACCGCCGACAAAGTCTCCGAGAAGCCCAAAACCTTACCCGAAAAAAGCAAAT
CAGACTCAACCAAATCAGACAAAGCAGTAAAAGAACCGAAAAAATCCGATAAGGCCGAAAGTAAAAAACCGGTTGAAAAA
GAGGGTTCGGACGGTAAAAAACACGAAACGGCATCCAAGGCAGACAAAGCCAAAACTGCCGAAAAAGAAAAATCCGAAAA
ATCCGGTAAAAAATCCGCCATCCAGGCAGGTTATGCCGAAAAAGAACGCGCCTTGAGCCTCCAGCGCAAAATGAAGGCAG
CCGGCATCGACTCGACCATTACTGAAATTATGACCGATAACGGCAAAGTTTACCGTGTCAAATCAAGCAACTATAAAAAC
GCGAGAGATGCCGAACGCGATTTGAACAAATTACGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAA

Domains

Predicted by InterproScan.

SPOR domain (SPOR)

(273-341)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3ES87

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

77.011

100

0.781