Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6G33_RS13305 Genome accession   NZ_CP065721
Coordinates   2785231..2785638 (-) Length   135 a.a.
NCBI ID   WP_003286242.1    Uniprot ID   A0A1S8EY13
Organism   Stutzerimonas degradans strain FDAARGOS_876     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2780231..2790638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G33_RS13285 (I6G33_13285) - 2781171..2782037 (-) 867 WP_043299523.1 CheR family methyltransferase -
  I6G33_RS13290 (I6G33_13290) - 2782101..2784149 (-) 2049 WP_102829092.1 methyl-accepting chemotaxis protein -
  I6G33_RS13295 (I6G33_13295) - 2784225..2784761 (-) 537 WP_008568494.1 chemotaxis protein CheW -
  I6G33_RS13300 (I6G33_13300) pilH 2784824..2785189 (-) 366 WP_008568495.1 twitching motility response regulator PilH -
  I6G33_RS13305 (I6G33_13305) pilG 2785231..2785638 (-) 408 WP_003286242.1 twitching motility response regulator PilG Regulator
  I6G33_RS13310 (I6G33_13310) gshB 2785871..2786821 (+) 951 WP_077682770.1 glutathione synthase -
  I6G33_RS13315 (I6G33_13315) - 2786909..2787802 (+) 894 WP_043299513.1 energy transducer TonB -
  I6G33_RS13320 (I6G33_13320) - 2787876..2788445 (+) 570 WP_043299512.1 YqgE/AlgH family protein -
  I6G33_RS13325 (I6G33_13325) ruvX 2788442..2788870 (+) 429 WP_043299511.1 Holliday junction resolvase RuvX -
  I6G33_RS13330 (I6G33_13330) pyrR 2788893..2789405 (+) 513 WP_102829093.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I6G33_RS13335 (I6G33_13335) - 2789415..2790431 (+) 1017 WP_102829094.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14854.27 Da        Isoelectric Point: 7.2439

>NTDB_id=513502 I6G33_RS13305 WP_003286242.1 2785231..2785638(-) (pilG) [Stutzerimonas degradans strain FDAARGOS_876]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFVPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=513502 I6G33_RS13305 WP_003286242.1 2785231..2785638(-) (pilG) [Stutzerimonas degradans strain FDAARGOS_876]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGATGATTCGAAAACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAAGTAGGTTGTGACGTCATCACGGCGGTGGATGGCTTCGATGCGCTCGCCAAGATCGCCGATACCCATCCGCGTA
TCATCTTTGTCGATATCATGATGCCTCGACTCGATGGTTATCAGACCTGCGCCTTGATCAAGAACAACAGCTCGTTCAAA
TCGACGCCGGTGATCATGCTGTCCTCCAAGGATGGCTTGTTCGACAAGGCGAAAGGGCGCATCGTCGGCTCCGATCAATA
CCTCACCAAACCTTTCAGCAAGGAAGAGCTGCTCGGCGCCATCAAGGCTCACGTTCCTGATTTCGTACCCGTCGAGCAGG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S8EY13

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4