Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6G34_RS03480 Genome accession   NZ_CP065720
Coordinates   780240..780647 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas frequens strain FDAARGOS_877     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 775240..785647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G34_RS03460 (I6G34_03460) - 776200..777066 (-) 867 WP_102838893.1 protein-glutamate O-methyltransferase CheR -
  I6G34_RS03465 (I6G34_03465) - 777128..779176 (-) 2049 WP_102838894.1 methyl-accepting chemotaxis protein -
  I6G34_RS03470 (I6G34_03470) - 779253..779789 (-) 537 WP_017245424.1 chemotaxis protein CheW -
  I6G34_RS03475 (I6G34_03475) pilH 779831..780196 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  I6G34_RS03480 (I6G34_03480) pilG 780240..780647 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  I6G34_RS03485 (I6G34_03485) gshB 780883..781833 (+) 951 WP_102838895.1 glutathione synthase -
  I6G34_RS03490 (I6G34_03490) - 781921..782814 (+) 894 WP_102838896.1 energy transducer TonB -
  I6G34_RS03495 (I6G34_03495) - 782959..783528 (+) 570 WP_102838897.1 YqgE/AlgH family protein -
  I6G34_RS03500 (I6G34_03500) ruvX 783525..783953 (+) 429 WP_017245428.1 Holliday junction resolvase RuvX -
  I6G34_RS03505 (I6G34_03505) pyrR 783975..784490 (+) 516 WP_102838898.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  I6G34_RS03510 (I6G34_03510) - 784549..785565 (+) 1017 WP_017245430.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=513450 I6G34_RS03480 WP_003282729.1 780240..780647(-) (pilG) [Stutzerimonas frequens strain FDAARGOS_877]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=513450 I6G34_RS03480 WP_003282729.1 780240..780647(-) (pilG) [Stutzerimonas frequens strain FDAARGOS_877]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCTGTTGACGGTTTCGATGCGCTCGCCAAGATTGCAGATACTCATCCTCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGACGGCTATCAGACCTGTGCACTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTCTTCGACAAGGCGAAAGGGCGTATCGTCGGGTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTAGGCGCAATCAAGGCGCACGTCCCTGATTTCGCGCCGGTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4