Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I6G42_RS00550 Genome accession   NZ_CP065707
Coordinates   121482..122519 (-) Length   345 a.a.
NCBI ID   WP_038804572.1    Uniprot ID   A0A7T2ZWT0
Organism   Streptococcus oralis strain FDAARGOS_885     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 116482..127519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G42_RS00525 (I6G42_00525) - 117375..118706 (-) 1332 WP_038804569.1 hemolysin family protein -
  I6G42_RS00530 (I6G42_00530) endA 118847..119671 (-) 825 WP_038804570.1 DNA/RNA non-specific endonuclease Machinery gene
  I6G42_RS00535 (I6G42_00535) - 119712..119903 (-) 192 WP_000791880.1 DNA-directed RNA polymerase subunit beta -
  I6G42_RS00540 (I6G42_00540) murA 119893..121173 (-) 1281 WP_038804571.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  I6G42_RS00545 (I6G42_00545) - 121196..121426 (-) 231 WP_080563327.1 DUF1146 family protein -
  I6G42_RS00550 (I6G42_00550) sepM 121482..122519 (-) 1038 WP_038804572.1 SepM family pheromone-processing serine protease Regulator
  I6G42_RS00555 (I6G42_00555) coaD 122503..122991 (-) 489 WP_038804573.1 pantetheine-phosphate adenylyltransferase -
  I6G42_RS00560 (I6G42_00560) rsmD 122981..123520 (-) 540 WP_038804574.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6G42_RS00565 (I6G42_00565) asnA 123585..124577 (-) 993 WP_038804575.1 aspartate--ammonia ligase -
  I6G42_RS00570 (I6G42_00570) - 124688..125371 (-) 684 WP_038804576.1 Bax inhibitor-1/YccA family protein -
  I6G42_RS00575 (I6G42_00575) - 125426..126166 (-) 741 WP_038804577.1 TrmH family RNA methyltransferase -
  I6G42_RS00580 (I6G42_00580) - 126200..126478 (+) 279 WP_038804579.1 acylphosphatase -
  I6G42_RS00585 (I6G42_00585) yidC 126556..127476 (+) 921 WP_038804799.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37593.79 Da        Isoelectric Point: 5.2751

>NTDB_id=513257 I6G42_RS00550 WP_038804572.1 121482..122519(-) (sepM) [Streptococcus oralis strain FDAARGOS_885]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRQVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAQETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLIDYVNSQKLGDPVKVTYEEDGRVKTAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALETAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=513257 I6G42_RS00550 WP_038804572.1 121482..122519(-) (sepM) [Streptococcus oralis strain FDAARGOS_885]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
ATACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCAAGTTTTGAAAGTCAATGAAACAGAAGATACAGAAGCAG
GGGCCTACCAGTTTGTAACAGTCGGTATTCGGCATGCAACCCTGTCGCATCTTGTCTATGCTTGGCTGACTCCATTTACG
GATATTAGAAGCGCTCAGGAGACAACGGGTGGTTCTACTGATGCAGAGTTTATGCGGATCAATCAGTTCTACATGCAAAC
ATCCCAAAATATGGCCAAGTATCAAGGTTTGAAGACGGCTGGTAAAGATATCGAACTCAAGTATCTAGGAGTTTATGTCT
TAACTGTGACGGATAATTCAACTTTTAAGGGTATTCTGAATATTGCAGACACGGTGACGGCTGTTAATGACAAAACATTT
GACAGTTCAAAAGACTTGATTGATTATGTCAACTCTCAAAAACTAGGCGATCCAGTCAAGGTAACCTACGAAGAAGACGG
AAGAGTCAAGACTGCTGAAGGTAAAATTATCACTCTCGAAAACGGAAAAAACGGGATTGGAATTGGTCTGATTGACCGTA
CGGAAGTGACCAGTGATGTTCCAATTCGCTTTTCAACAGCTGGTATTGGCGGGCCAAGTGCCGGTCTCATGTTTAGCTTA
GCTATCTACACCCAGATAGCAGATCCAGGACTTCGTAATGGTCGCATCGTTGCGGGAACGGGAACCATTGATCGCGATGG
GAATGTTGGCGACATCGGTGGAATTGACAAAAAAGTGGTGGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCGAAAAAAGCAGATCCCAATGCGAAAAGCAACTATGAAACAGCCTTAGAAACTGCTAAA
ACGATCAAAACAGAGATGAAAATCGTTCCCGTTAAGACCTTGCAGGATGCGATCGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7T2ZWT0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.942

99.13

0.594