Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   I6G80_RS01285 Genome accession   NZ_CP065647
Coordinates   185451..185849 (+) Length   132 a.a.
NCBI ID   WP_017473998.1    Uniprot ID   A0AB37GU74
Organism   Bacillus licheniformis strain FDAARGOS_923     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 180451..190849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G80_RS01260 (I6G80_01260) - 181149..181889 (+) 741 WP_003178817.1 ribonuclease YeeF family protein -
  I6G80_RS01265 (I6G80_01265) - 182080..183689 (+) 1610 Protein_151 methyl-accepting chemotaxis protein -
  I6G80_RS01270 (I6G80_01270) - 183709..184512 (-) 804 WP_017473997.1 serine/threonine protein kinase -
  I6G80_RS01275 (I6G80_01275) - 184518..184721 (-) 204 WP_003178812.1 hypothetical protein -
  I6G80_RS01280 (I6G80_01280) nucA/comI 184987..185433 (+) 447 WP_009330244.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  I6G80_RS01285 (I6G80_01285) nin/comJ 185451..185849 (+) 399 WP_017473998.1 competence protein ComJ Regulator
  I6G80_RS01290 (I6G80_01290) - 185888..187324 (-) 1437 WP_017473999.1 glycoside hydrolase family 1 protein -
  I6G80_RS01295 (I6G80_01295) - 187394..188119 (-) 726 WP_003178804.1 AAA family ATPase -
  I6G80_RS01300 (I6G80_01300) - 188216..188768 (-) 553 Protein_158 NAD(P)H-dependent oxidoreductase -
  I6G80_RS01305 (I6G80_01305) - 188952..189827 (+) 876 WP_003178801.1 transporter substrate-binding domain-containing protein -
  I6G80_RS01310 (I6G80_01310) - 189839..190522 (+) 684 WP_003178799.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15034.13 Da        Isoelectric Point: 5.6435

>NTDB_id=512502 I6G80_RS01285 WP_017473998.1 185451..185849(+) (nin/comJ) [Bacillus licheniformis strain FDAARGOS_923]
MIKKWEAQEMTMSYHQFTVYQKGGKPPVMDWTDEDIKRGYTTGEHAVSFEALENTASSVEVRLNVQKQVLSFNRRVTVPF
EVLYDGVEIASVLSKKLTCDIPQGAYQLTCYTIMPDHSGTAQITYLLDFKQA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=512502 I6G80_RS01285 WP_017473998.1 185451..185849(+) (nin/comJ) [Bacillus licheniformis strain FDAARGOS_923]
TTGATCAAAAAGTGGGAAGCACAAGAAATGACGATGTCATACCATCAGTTTACCGTTTATCAGAAAGGCGGAAAGCCGCC
CGTTATGGATTGGACAGACGAGGATATTAAAAGAGGATATACAACGGGAGAGCACGCGGTCTCGTTTGAAGCTCTCGAAA
ACACGGCATCTTCAGTAGAAGTCCGTTTGAATGTCCAAAAACAGGTGCTCTCCTTCAACAGGCGCGTCACCGTTCCTTTC
GAAGTGCTTTATGACGGGGTCGAAATTGCAAGCGTTCTATCCAAGAAATTGACATGCGATATCCCGCAAGGCGCCTATCA
GCTGACATGCTATACAATAATGCCTGATCACAGCGGCACTGCACAGATCACCTATCTTCTCGATTTTAAACAGGCTTGA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

50

96.97

0.485