Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   I6G86_RS09830 Genome accession   NZ_CP065637
Coordinates   1913539..1914222 (-) Length   227 a.a.
NCBI ID   WP_004259224.1    Uniprot ID   A0A1I4FNQ8
Organism   Lactococcus garvieae strain FDAARGOS_929     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1908539..1919222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G86_RS09810 (I6G86_09815) - 1908892..1910103 (-) 1212 WP_042217288.1 cysteine desulfurase -
  I6G86_RS09815 (I6G86_09820) sufD 1910103..1911359 (-) 1257 WP_019299087.1 Fe-S cluster assembly protein SufD -
  I6G86_RS09820 (I6G86_09825) sufC 1911431..1912201 (-) 771 WP_042217290.1 Fe-S cluster assembly ATPase SufC -
  I6G86_RS09825 (I6G86_09830) - 1912279..1913535 (-) 1257 WP_042217292.1 glycosyltransferase family 4 protein -
  I6G86_RS09830 (I6G86_09835) mecA 1913539..1914222 (-) 684 WP_004259224.1 adaptor protein MecA Regulator
  I6G86_RS09835 (I6G86_09840) - 1914466..1915374 (+) 909 WP_042217295.1 diacylglycerol kinase family protein -
  I6G86_RS09840 (I6G86_09845) rpoC 1915467..1919114 (-) 3648 WP_004259228.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26239.38 Da        Isoelectric Point: 4.0202

>NTDB_id=512412 I6G86_RS09830 WP_004259224.1 1913539..1914222(-) (mecA) [Lactococcus garvieae strain FDAARGOS_929]
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVNIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGTMADTSTTETKETKVENKPDPDFVFYSLEFENMSQLLTAVKNVKIDAE
ESELYSYQDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETVNSRETLQEYGEILINTRALEVLSKI

Nucleotide


Download         Length: 684 bp        

>NTDB_id=512412 I6G86_RS09830 WP_004259224.1 1913539..1914222(-) (mecA) [Lactococcus garvieae strain FDAARGOS_929]
ATGCAATACGAAGAAATAAACGAAAAAACGATAAAGATTAGCCTAACCTTTCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACTAACCAGTCGATGGTTGAAAATCTTTTTTATGAATTAGTAGAAGAACTGGGACTTGAGGAAAGAT
TCTCATCAGGACTTTTAACTTTCCAAATTCAACCTTTCCCTAAAGGGGTGAATATCATTGTTACCGAGGAAAATATTGAT
ATTGATCCCAATAATCTCCCGGATGATCCTGAAGAATTTGAGCAGCTGATGACGGATTTCTTTGGGCGTGTGGAAGATTT
AAAACAAAATGGCGGAACAATGGCAGATACAAGTACAACTGAAACGAAAGAAACAAAAGTAGAAAATAAACCAGACCCAG
ATTTTGTCTTCTATTCTCTAGAATTTGAAAATATGTCTCAACTTTTGACAGCTGTAAAAAATGTTAAAATTGATGCAGAA
GAGTCTGAACTTTACAGTTACCAAGATAAGTTTTATTTGATTATTTTGGACAATCAAAAATCAAAAGGAAAAACAGCCGT
AAGTTCGATGCGTGCTCGAATGTTAGAATATGGCCAGGAAACGGTCAACAGTCGTGAAACCCTACAAGAATACGGCGAGA
TACTAATCAATACGCGTGCTTTGGAAGTTCTCTCAAAAATTTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1I4FNQ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

54.661

100

0.568
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

54.077

100

0.555