Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SPAF_RS02125 Genome accession   NC_017905
Coordinates   402476..403735 (+) Length   419 a.a.
NCBI ID   WP_014712858.1    Uniprot ID   -
Organism   Streptococcus parasanguinis FW213     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 397476..408735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPAF_RS02100 (Spaf_0388) - 397640..399769 (+) 2130 WP_014712856.1 ATP-dependent Clp protease ATP-binding subunit -
  SPAF_RS02105 (Spaf_0389) - 399995..400240 (+) 246 WP_037616900.1 hypothetical protein -
  SPAF_RS02110 (Spaf_0390) yajC 400396..400722 (+) 327 WP_003016077.1 preprotein translocase subunit YajC -
  SPAF_RS02115 (Spaf_0391) - 400877..401626 (+) 750 WP_003016124.1 isoprenyl transferase -
  SPAF_RS02120 (Spaf_0392) - 401636..402439 (+) 804 WP_041818427.1 phosphatidate cytidylyltransferase -
  SPAF_RS02125 (Spaf_0393) eeP 402476..403735 (+) 1260 WP_014712858.1 RIP metalloprotease RseP Regulator
  SPAF_RS02130 (Spaf_0394) - 403751..405601 (+) 1851 WP_041826219.1 proline--tRNA ligase -
  SPAF_RS02135 (Spaf_0395) - 406207..406494 (+) 288 WP_003016069.1 WXG100 family type VII secretion target -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45917.36 Da        Isoelectric Point: 6.6614

>NTDB_id=51115 SPAF_RS02125 WP_014712858.1 402476..403735(+) (eeP) [Streptococcus parasanguinis FW213]
MQFIAFIVIFGVIVLVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGQDGTAYTIRILPLGGYVRMAGWGEDTTEIKTG
TPVSLTVNEAGKVVRINLSGKNLDQTALPMNVTQFDFEDKLEITGLVLDETKTYSVDHDATIVEEDGTEVRIAPRDVQYQ
NASIWGRLITNFAGPMNNFILSIVVYSLLAFMRGGAIDYYSNNVQVAPDGALAKVGVKSTVQILQVNNDTVSNWDELTDA
VEKATKDSKTTPELTLKVKTDGQEKEVKVKPTKSGDRYYLGVTNGLKTGFVDKLLSGFTDTWNTATRILGALKDIIFHFS
LNKLGGPVAIYNASSQAAQLGIPAVLSLMAMLSINIGIFNLIPIPALDGGKILINLIEVVRRKPLKQEVETYMTLAGVAV
MVILMIAVTWNDIMKLFLK

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=51115 SPAF_RS02125 WP_014712858.1 402476..403735(+) (eeP) [Streptococcus parasanguinis FW213]
ATGCAGTTTATTGCCTTTATAGTTATTTTTGGAGTGATCGTTCTCGTTCACGAGTTTGGTCATTTCTATTTTGCAAAAAA
ATCGGGCATCCTAGTGCGAGAATTCTCGATCGGGATGGGACCAAAAATCTTTGCCCATATTGGTCAAGATGGAACAGCTT
ATACCATTCGCATTCTACCTTTAGGTGGCTATGTTCGTATGGCTGGCTGGGGTGAGGATACAACTGAGATTAAAACCGGA
ACGCCTGTCAGCTTGACAGTAAATGAAGCTGGTAAGGTCGTCCGGATCAATCTTTCTGGAAAGAATCTGGATCAGACAGC
CCTTCCCATGAATGTTACCCAGTTTGACTTTGAAGACAAACTGGAAATTACGGGCTTGGTTCTCGATGAGACTAAGACCT
ATAGTGTTGATCATGATGCGACTATCGTTGAAGAAGATGGGACAGAAGTGCGGATTGCACCGAGAGATGTTCAGTATCAG
AATGCCAGCATTTGGGGACGATTAATCACCAACTTTGCGGGTCCTATGAACAACTTTATCCTCAGTATTGTCGTCTACTC
ACTTTTAGCCTTTATGCGCGGTGGTGCGATTGACTACTACAGCAACAATGTTCAGGTGGCACCCGATGGGGCGCTTGCTA
AGGTCGGTGTCAAAAGCACTGTTCAGATCCTTCAAGTCAACAACGATACCGTCAGCAACTGGGATGAACTGACAGATGCT
GTCGAGAAGGCAACCAAGGACAGCAAGACGACTCCTGAATTGACCCTGAAAGTCAAGACAGACGGCCAAGAAAAAGAAGT
CAAAGTGAAGCCAACCAAGTCAGGGGATCGTTACTATCTGGGTGTGACAAACGGCCTCAAGACAGGATTTGTAGATAAAC
TCTTGTCTGGTTTTACAGATACCTGGAATACAGCGACACGGATTTTGGGAGCTTTGAAAGATATTATTTTCCACTTTAGT
CTCAATAAACTGGGTGGTCCGGTTGCCATCTACAATGCCAGCTCACAAGCTGCTCAATTAGGGATTCCGGCAGTGTTATC
TCTTATGGCCATGCTCTCTATTAATATTGGCATCTTCAATCTAATCCCGATTCCGGCTTTGGATGGCGGGAAAATCTTGA
TCAATTTGATCGAAGTGGTTCGGAGAAAACCACTAAAACAAGAAGTAGAAACCTATATGACACTTGCAGGTGTAGCTGTA
ATGGTTATTTTGATGATTGCTGTCACCTGGAATGATATTATGAAATTATTTTTGAAATAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(5-404)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.865

99.284

0.654
  eeP Streptococcus thermophilus LMD-9

65.625

99.284

0.652

Multiple sequence alignment