Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   STAVA116_RS01075 Genome accession   NZ_CP065498
Coordinates   192952..194214 (+) Length   420 a.a.
NCBI ID   WP_087009648.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain AVA116     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 187952..199214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAVA116_RS01050 (STAVA116_01040) - 188532..189881 (+) 1350 WP_011680683.1 glucose-6-phosphate isomerase -
  STAVA116_RS01055 (STAVA116_01045) - 190070..190786 (+) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  STAVA116_RS01060 (STAVA116_01050) - 190912..191250 (+) 339 WP_011225395.1 preprotein translocase subunit YajC -
  STAVA116_RS01065 (STAVA116_01055) - 191379..192128 (+) 750 WP_002949314.1 isoprenyl transferase -
  STAVA116_RS01070 (STAVA116_01060) - 192141..192935 (+) 795 WP_087009647.1 phosphatidate cytidylyltransferase -
  STAVA116_RS01075 (STAVA116_01065) eeP 192952..194214 (+) 1263 WP_087009648.1 RIP metalloprotease RseP Regulator
  STAVA116_RS01080 (STAVA116_01070) - 194285..196147 (+) 1863 WP_011680686.1 proline--tRNA ligase -
  STAVA116_RS01085 (STAVA116_01075) - 196764..198704 (+) 1941 WP_087009649.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45665.10 Da        Isoelectric Point: 6.5104

>NTDB_id=511117 STAVA116_RS01075 WP_087009648.1 192952..194214(+) (eeP) [Streptococcus thermophilus strain AVA116]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVTNGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPILKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=511117 STAVA116_RS01075 WP_087009648.1 192952..194214(+) (eeP) [Streptococcus thermophilus strain AVA116]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACAGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGACTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGGAGCTACTTTTTAGGTGTCTCTCCTATCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(6-406)

(204-272)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

99.524

100

0.995

  eeP Streptococcus thermophilus LMG 18311

99.286

100

0.993