Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   STCNRZ385_RS07760 Genome accession   NZ_CP065495
Coordinates   1497901..1498935 (-) Length   344 a.a.
NCBI ID   WP_375709249.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ385     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1492901..1503935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ385_RS07735 (STCNRZ385_07725) ilvD 1493153..1494871 (-) 1719 WP_024010047.1 dihydroxy-acid dehydratase -
  STCNRZ385_RS07740 (STCNRZ385_07730) - 1494984..1496165 (+) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -
  STCNRZ385_RS07750 (STCNRZ385_07740) trmB 1496401..1497042 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  STCNRZ385_RS07755 (STCNRZ385_07745) ccrZ 1497052..1497843 (-) 792 WP_002951667.1 cell cycle regulator CcrZ -
  STCNRZ385_RS07760 (STCNRZ385_07750) pptB 1497901..1498935 (-) 1035 WP_375709249.1 ABC transporter permease Regulator
  STCNRZ385_RS07765 (STCNRZ385_07755) pptA 1498935..1499666 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  STCNRZ385_RS07770 (STCNRZ385_07760) - 1499731..1500150 (+) 420 WP_180483375.1 HIT family protein -
  STCNRZ385_RS07775 (STCNRZ385_07765) - 1500147..1500455 (+) 309 WP_116920336.1 hypothetical protein -
  STCNRZ385_RS07780 - 1501007..1501177 (-) 171 WP_011226439.1 hypothetical protein -
  STCNRZ385_RS07785 (STCNRZ385_07775) - 1501247..1501882 (-) 636 WP_064355817.1 DUF4230 domain-containing protein -
  STCNRZ385_RS07790 - 1501901..1502026 (-) 126 WP_011681534.1 hypothetical protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40018.51 Da        Isoelectric Point: 10.5243

>NTDB_id=511034 STCNRZ385_RS07760 WP_375709249.1 1497901..1498935(-) (pptB) [Streptococcus thermophilus strain CNRZ385]
MAELFKERSRRFTTRCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRHFPKNPWAIILGLLVLCLLLPFWGNIATYLEP
ADKHYLLVKEEEVLDHIKKATGCAFRFWVLIQTLIFILVVPLFLALGLPVWGVVLVAVAMAILKYFIFQKKAQPFYKQSG
LNWTDAIAAENKRQQSILKFFSLFTNVKGITSSIKRRGYLDGILKRTKKDKKHTWYNLYLRAFLRSGDYFALSLRLFALT
LLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMTNLMPIGKDMQVSNLKRLINQIVLVMTLIQALCLFDLKFS
LILIGVMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=511034 STCNRZ385_RS07760 WP_375709249.1 1497901..1498935(-) (pptB) [Streptococcus thermophilus strain CNRZ385]
ATAGCTGAGCTTTTTAAGGAGCGTAGCAGACGATTCACTACCCGTTGTGCTAAGTATAGTCGCTACGTCTTTAATGACCA
CTTTATCCTGGTTCTTCTTTTTTTGCTGGGTTTTGTCTTGGTTCAGTATAGCCAGTTGCTCCGACATTTTCCAAAGAATC
CATGGGCCATCATTCTTGGCTTACTTGTGCTTTGTCTCTTACTGCCTTTTTGGGGCAATATTGCCACCTATTTAGAGCCT
GCAGACAAGCACTACCTCTTAGTTAAGGAAGAAGAGGTGCTAGACCATATTAAGAAGGCGACAGGGTGTGCTTTTAGATT
TTGGGTGCTCATCCAGACCTTGATTTTTATCTTGGTCGTCCCACTCTTTCTGGCCTTGGGTCTTCCAGTTTGGGGAGTTG
TCCTTGTAGCCGTGGCTATGGCTATTCTTAAGTATTTTATTTTCCAAAAGAAAGCACAACCTTTTTATAAGCAGTCTGGG
TTGAATTGGACTGATGCTATTGCAGCGGAGAATAAACGACAACAATCAATCTTGAAGTTCTTCTCACTCTTTACCAATGT
TAAGGGAATTACATCGAGTATTAAACGCCGTGGTTATTTGGATGGCATTCTCAAGCGTACAAAGAAAGACAAGAAACATA
CGTGGTACAACCTGTACCTAAGAGCCTTCTTACGTTCAGGAGATTACTTTGCCCTTAGCCTACGCCTTTTTGCTTTAACA
CTTTTGGTTATTTTTTTGGTTCCTGAAAAATGGCTGGCTATGGTACTTGTGGTTGTTTTTGACTATCTCTTACTCTTCCA
GCTCACAGCGCTTAAATCGCACTTTGCTTACCAAAGGATGACCAACCTTATGCCAATTGGAAAAGACATGCAGGTGAGCA
ATCTTAAGCGCTTGATTAATCAAATTGTCCTTGTAATGACACTGATTCAGGCTCTTTGTCTCTTTGACCTTAAATTTAGC
CTGATTTTGATTGGAGTTATGCTAGTTTTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

98.256

100

0.983

  pptB Streptococcus salivarius strain HSISS4

92.733

100

0.927