Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ST4145_RS05300 Genome accession   NZ_CP065492
Coordinates   1023164..1023973 (-) Length   269 a.a.
NCBI ID   WP_024704147.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 4145     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1018164..1028973
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4145_RS05275 (ST4145_05225) - 1019102..1019488 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  ST4145_RS05280 (ST4145_05230) - 1019546..1020458 (-) 913 Protein_984 GNAT family N-acetyltransferase -
  ST4145_RS05285 (ST4145_05235) yidA 1020666..1021475 (+) 810 WP_011226081.1 sugar-phosphatase -
  ST4145_RS05290 (ST4145_05240) - 1021477..1022691 (+) 1215 WP_002953123.1 aminoacyltransferase -
  ST4145_RS05295 (ST4145_05245) - 1022743..1023104 (-) 362 Protein_987 YbaN family protein -
  ST4145_RS05300 (ST4145_05250) vicX 1023164..1023973 (-) 810 WP_024704147.1 MBL fold metallo-hydrolase Regulator
  ST4145_RS05305 (ST4145_05255) vicK 1023982..1025322 (-) 1341 WP_014621665.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ST4145_RS05310 (ST4145_05260) vicR 1025315..1026022 (-) 708 WP_024009930.1 response regulator YycF Regulator
  ST4145_RS05315 (ST4145_05265) - 1026546..1027313 (+) 768 WP_011681207.1 amino acid ABC transporter ATP-binding protein -
  ST4145_RS05320 (ST4145_05270) - 1027325..1028158 (+) 834 WP_011681208.1 transporter substrate-binding domain-containing protein -
  ST4145_RS05325 (ST4145_05275) - 1028176..1028874 (+) 699 WP_002953144.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29943.90 Da        Isoelectric Point: 5.5779

>NTDB_id=510900 ST4145_RS05300 WP_024704147.1 1023164..1023973(-) (vicX) [Streptococcus thermophilus strain 4145]
MSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGMD
IYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAG
LIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTMEN
QLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=510900 ST4145_RS05300 WP_024704147.1 1023164..1023973(-) (vicX) [Streptococcus thermophilus strain 4145]
ATCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGAAAA
GAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTGATC
TTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATGGAT
ATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACATAT
TTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATCCAC
AATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCTGGT
CTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTGGTC
AACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCGGTA
ATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAAAAT
CAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACTAAC
AGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781