Detailed information NTG0510848

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: STCNRZ887_RS06440
• Genome accession: NZ_CP065491
• Coordinates: 1255589..1256515 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CNRZ887
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1250589..1261515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ887_RS06410 (STCNRZ887_06435)	-	1250668..1251462 (-)	795	WP_059257398.1	HAD family hydrolase	-
STCNRZ887_RS06415 (STCNRZ887_06440)	-	1251645..1252022 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
STCNRZ887_RS06420 (STCNRZ887_06445)	-	1252027..1252725 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
STCNRZ887_RS06425 (STCNRZ887_06450)	-	1252737..1253522 (+)	786	WP_002951425.1	hypothetical protein	-
STCNRZ887_RS06430 (STCNRZ887_06455)	amiF	1253572..1254501 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
STCNRZ887_RS06435 (STCNRZ887_06460)	amiE	1254494..1255579 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
STCNRZ887_RS06440 (STCNRZ887_06465)	amiD	1255589..1256515 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
STCNRZ887_RS06445 (STCNRZ887_06470)	amiC	1256515..1258008 (-)	1494	WP_011227407.1	ABC transporter permease	Regulator
STCNRZ887_RS06450 (STCNRZ887_06475)	amiA	1258070..1260037 (-)	1968	WP_011225333.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=510848 STCNRZ887_RS06440 WP_002946409.1 1255589..1256515(-) (amiD) [Streptococcus thermophilus strain CNRZ887]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=510848 STCNRZ887_RS06440 WP_002946409.1 1255589..1256515(-) (amiD) [Streptococcus thermophilus strain CNRZ887]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964