Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   STCNRZ1575_RS07710 Genome accession   NZ_CP065490
Coordinates   1477660..1478391 (-) Length   243 a.a.
NCBI ID   WP_002951673.1    Uniprot ID   A0AAP2RM94
Organism   Streptococcus thermophilus strain CNRZ1575     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1472660..1483391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1575_RS07685 (STCNRZ1575_07665) - 1473709..1474890 (+) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -
  STCNRZ1575_RS07695 (STCNRZ1575_07675) trmB 1475126..1475767 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  STCNRZ1575_RS07700 (STCNRZ1575_07680) - 1475777..1476568 (-) 792 WP_002951667.1 phosphotransferase family protein -
  STCNRZ1575_RS07705 (STCNRZ1575_07685) pptB 1476626..1477663 (-) 1038 WP_087010122.1 ABC transporter permease Regulator
  STCNRZ1575_RS07710 (STCNRZ1575_07690) pptA 1477660..1478391 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  STCNRZ1575_RS07715 (STCNRZ1575_07695) - 1478456..1478875 (+) 420 WP_014621894.1 HIT family protein -
  STCNRZ1575_RS07720 (STCNRZ1575_07700) - 1478872..1479171 (+) 300 WP_101415677.1 hypothetical protein -
  STCNRZ1575_RS07725 (STCNRZ1575_07705) - 1479223..1479951 (-) 729 WP_023909893.1 hypothetical protein -
  STCNRZ1575_RS07730 (STCNRZ1575_07710) - 1479969..1480604 (-) 636 WP_023909894.1 DUF4230 domain-containing protein -
  STCNRZ1575_RS07735 - 1480623..1480748 (-) 126 WP_260214188.1 hypothetical protein -
  STCNRZ1575_RS07740 (STCNRZ1575_07715) - 1481162..1483267 (-) 2106 WP_260214189.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26830.05 Da        Isoelectric Point: 4.4606

>NTDB_id=510797 STCNRZ1575_RS07710 WP_002951673.1 1477660..1478391(-) (pptA) [Streptococcus thermophilus strain CNRZ1575]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=510797 STCNRZ1575_RS07710 WP_002951673.1 1477660..1478391(-) (pptA) [Streptococcus thermophilus strain CNRZ1575]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTATGCCAATATTCCCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

100

100

1
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971