Detailed information NTG0510550

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: STR1_RS06820
• Genome accession: NZ_CP065486
• Coordinates: 1326640..1327725 (-)
• Length: 361 a.a.
• NCBI ID: WP_011226304.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain R1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1321640..1332725

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STR1_RS06790 (STR1_06840)	-	1322005..1322820 (-)	816	WP_014608539.1	Cof-type HAD-IIB family hydrolase	-
STR1_RS06795 (STR1_06845)	-	1322813..1323607 (-)	795	WP_011681412.1	HAD family hydrolase	-
STR1_RS06800 (STR1_06850)	-	1323791..1324168 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
STR1_RS06805 (STR1_06855)	-	1324173..1324871 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
STR1_RS06810 (STR1_06860)	-	1324883..1325668 (+)	786	WP_002951425.1	hypothetical protein	-
STR1_RS06815 (STR1_06865)	amiF	1325718..1326647 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
STR1_RS06820 (STR1_06870)	amiE	1326640..1327725 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
STR1_RS06825 (STR1_06875)	amiD	1327735..1328661 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
STR1_RS06830 (STR1_06880)	amiC	1328661..1330154 (-)	1494	WP_011681416.1	ABC transporter permease	Regulator
STR1_RS06835 (STR1_06885)	amiA	1330216..1332183 (-)	1968	WP_011681417.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39864.62 Da
• Isoelectric Point: 4.7435

>NTDB_id=510550 STR1_RS06820 WP_011226304.1 1326640..1327725(-) (amiE) [Streptococcus thermophilus strain R1]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide

• Length: 1086 bp

>NTDB_id=510550 STR1_RS06820 WP_011226304.1 1326640..1327725(-) (amiE) [Streptococcus thermophilus strain R1]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	100	100	1
amiE	Streptococcus thermophilus LMD-9	100	100	1
amiE	Streptococcus salivarius strain HSISS4	96.953	100	0.97
oppD	Streptococcus mutans UA159	54.441	96.676	0.526