Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   STMM20_RS08920 Genome accession   NZ_CP065485
Coordinates   1755318..1756580 (-) Length   420 a.a.
NCBI ID   WP_011680685.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM20     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1750318..1761580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM20_RS08910 (STMM20_08880) - 1750828..1752768 (-) 1941 WP_024704168.1 ABC transporter substrate binding protein -
  STMM20_RS08915 (STMM20_08885) - 1753385..1755247 (-) 1863 WP_023909361.1 proline--tRNA ligase -
  STMM20_RS08920 (STMM20_08890) eeP 1755318..1756580 (-) 1263 WP_011680685.1 RIP metalloprotease RseP Regulator
  STMM20_RS08925 (STMM20_08895) - 1756597..1757391 (-) 795 WP_071417510.1 phosphatidate cytidylyltransferase -
  STMM20_RS08930 (STMM20_08900) - 1757404..1758153 (-) 750 WP_002949314.1 isoprenyl transferase -
  STMM20_RS08935 (STMM20_08905) - 1758282..1758620 (-) 339 WP_011225395.1 preprotein translocase subunit YajC -
  STMM20_RS08940 (STMM20_08910) - 1758746..1759462 (-) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  STMM20_RS08945 (STMM20_08915) - 1759650..1760999 (-) 1350 WP_011680683.1 glucose-6-phosphate isomerase -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45621.05 Da        Isoelectric Point: 6.5104

>NTDB_id=510503 STMM20_RS08920 WP_011680685.1 1755318..1756580(-) (eeP) [Streptococcus thermophilus strain MM20]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVANGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=510503 STMM20_RS08920 WP_011680685.1 1755318..1756580(-) (eeP) [Streptococcus thermophilus strain MM20]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACTGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGGCTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGAAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(204-272)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

100

100

1

  eeP Streptococcus thermophilus LMG 18311

99.762

100

0.998