Detailed information NTG0510481

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: STMM20_RS04550
• Genome accession: NZ_CP065485
• Coordinates: 881175..882056 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain MM20
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 876175..887056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STMM20_RS04525	-	877318..878130 (+)	813	WP_023909695.1	hypothetical protein	-
STMM20_RS04530 (STMM20_04525)	galE	878145..879158 (+)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
STMM20_RS04535 (STMM20_04530)	-	879346..879582 (+)	237	WP_002946959.1	DUF1146 family protein	-
STMM20_RS04540 (STMM20_04535)	murA	879652..880923 (+)	1272	WP_347103673.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
STMM20_RS04545 (STMM20_04540)	-	880925..881113 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
STMM20_RS04550 (STMM20_04545)	endA	881175..882056 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
STMM20_RS04555 (STMM20_04550)	-	882128..882778 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
STMM20_RS04560 (STMM20_04555)	-	882790..883488 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
STMM20_RS04565 (STMM20_04560)	-	883506..884339 (-)	834	WP_134973271.1	transporter substrate-binding domain-containing protein	-
STMM20_RS04570 (STMM20_04565)	-	884351..885118 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
STMM20_RS04575 (STMM20_04570)	vicR	885645..886352 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=510481 STMM20_RS04550 WP_011681210.1 881175..882056(+) (endA) [Streptococcus thermophilus strain MM20]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=510481 STMM20_RS04550 WP_011681210.1 881175..882056(+) (endA) [Streptococcus thermophilus strain MM20]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594