Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   STCNRZ760_RS07855 Genome accession   NZ_CP065482
Coordinates   1503483..1504520 (-) Length   345 a.a.
NCBI ID   WP_180481084.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ760     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1498483..1509520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ760_RS07830 (STCNRZ760_07770) ilvD 1498735..1500438 (-) 1704 WP_014727663.1 dihydroxy-acid dehydratase -
  STCNRZ760_RS07835 (STCNRZ760_07775) - 1500566..1501747 (+) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -
  STCNRZ760_RS07845 (STCNRZ760_07785) trmB 1501983..1502624 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  STCNRZ760_RS07850 (STCNRZ760_07790) - 1502634..1503425 (-) 792 WP_002951667.1 phosphotransferase family protein -
  STCNRZ760_RS07855 (STCNRZ760_07795) pptB 1503483..1504520 (-) 1038 WP_180481084.1 ABC transporter permease Regulator
  STCNRZ760_RS07860 (STCNRZ760_07800) pptA 1504517..1505248 (-) 732 WP_002947523.1 ABC transporter ATP-binding protein Regulator
  STCNRZ760_RS07865 (STCNRZ760_07805) - 1505313..1505732 (+) 420 WP_002891660.1 HIT family protein -
  STCNRZ760_RS07870 (STCNRZ760_07810) - 1505729..1506037 (+) 309 WP_180477129.1 hypothetical protein -
  STCNRZ760_RS07875 - 1506079..1506294 (-) 216 WP_096811621.1 hypothetical protein -
  STCNRZ760_RS07880 - 1506589..1506759 (-) 171 WP_011226439.1 hypothetical protein -
  STCNRZ760_RS07885 (STCNRZ760_07820) - 1506829..1507464 (-) 636 WP_014727665.1 DUF4230 domain-containing protein -
  STCNRZ760_RS07890 - 1507483..1507608 (-) 126 WP_011681534.1 hypothetical protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 40239.81 Da        Isoelectric Point: 10.5363

>NTDB_id=510324 STCNRZ760_RS07855 WP_180481084.1 1503483..1504520(-) (pptB) [Streptococcus thermophilus strain CNRZ760]
MIAELFKERSRRFTTRCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRHFPKNPWAIILGLLVLCLLLPFWGNIATYLE
PADKHYLLVKEEEVLDHIKKATGCAFRFWVLIQTLIFILVVPLFLALGLPVWRVVLVAVAMAILKYFIFQKKAQPFYKQS
GLNWTDAIAAENKRQQSILKFFSLFTNVKGITSSVKRRGYLDGILKRTKKDKKYTWYNLYLRAFLRSGDYFALSLRLFAL
TLLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPIGKDMQVNNLKRLINQIVLVMTLIQALCLFDLKF
SLILIGVMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=510324 STCNRZ760_RS07855 WP_180481084.1 1503483..1504520(-) (pptB) [Streptococcus thermophilus strain CNRZ760]
ATGATAGCTGAGCTTTTTAAGGAGCGTAGCAGACGATTCACTACCCGTTGTGCTAAGTATAGTCGCTACGTCTTTAATGA
CCACTTTATCCTGGTTCTTCTTTTTTTGCTGGGTTTTGTCTTGGTTCAGTATAGCCAGTTGCTCCGACATTTTCCAAAGA
ATCCATGGGCCATCATTCTTGGCTTACTTGTGCTTTGTCTCTTACTGCCTTTTTGGGGCAATATTGCCACCTATTTAGAG
CCTGCAGACAAGCACTACCTCTTAGTTAAGGAAGAAGAGGTGCTAGACCATATTAAGAAGGCGACAGGGTGTGCTTTTAG
ATTTTGGGTGCTCATCCAGACCTTGATTTTTATCTTGGTCGTCCCACTCTTTCTGGCCTTGGGTCTTCCAGTTTGGAGAG
TTGTCCTTGTAGCCGTGGCTATGGCTATTCTTAAGTATTTTATTTTCCAAAAGAAAGCACAACCTTTTTATAAGCAGTCT
GGGTTGAATTGGACTGATGCTATTGCAGCAGAGAATAAACGACAACAATCAATCTTGAAGTTTTTCTCACTTTTTACCAA
TGTTAAGGGAATTACATCGAGTGTTAAACGCCGTGGCTATTTGGATGGCATTCTCAAGCGTACAAAGAAAGACAAGAAAT
ATACGTGGTACAACCTGTACCTGAGAGCCTTCTTACGTTCAGGAGATTACTTTGCCCTTAGCCTACGCCTTTTTGCTTTA
ACACTTTTGGTTATTTTTTTGGTTCCTGAAAAATGGCTGGCTATGGTACTTGTGGTTGTTTTTGACTATCTCTTACTCTT
CCAGCTCACAGCGCTTAAATCGCACTTTGCTTACCAAAGGATGGCCAACCTTATGCCAATTGGAAAAGACATGCAGGTGA
ACAATCTTAAGCGCTTGATTAATCAAATTGTCCTTGTAATGACACTGATTCAGGCTCTTTGTCTCTTTGACCTTAAATTT
AGCCTGATTTTGATTGGAGTTATGCTAGTTTTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

98.256

99.71

0.98

  pptB Streptococcus salivarius strain HSISS4

92.151

99.71

0.919