Detailed information NTG0510317

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: STCNRZ760_RS06945
• Genome accession: NZ_CP065482
• Coordinates: 1328009..1328935 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CNRZ760
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1323009..1333935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ760_RS06915 (STCNRZ760_06860)	-	1323087..1323881 (-)	795	WP_180481058.1	HAD family hydrolase	-
STCNRZ760_RS06920 (STCNRZ760_06865)	-	1324065..1324442 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
STCNRZ760_RS06925 (STCNRZ760_06870)	-	1324447..1325145 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
STCNRZ760_RS06930 (STCNRZ760_06875)	-	1325157..1325942 (+)	786	WP_176243303.1	ABC transporter permease	-
STCNRZ760_RS06935 (STCNRZ760_06880)	amiF	1325992..1326921 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
STCNRZ760_RS06940 (STCNRZ760_06885)	amiE	1326914..1327999 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
STCNRZ760_RS06945 (STCNRZ760_06890)	amiD	1328009..1328935 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
STCNRZ760_RS06950 (STCNRZ760_06895)	amiC	1328935..1330428 (-)	1494	WP_002946410.1	ABC transporter permease	Regulator
STCNRZ760_RS06955 (STCNRZ760_06900)	amiA	1330490..1332457 (-)	1968	WP_180481059.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=510317 STCNRZ760_RS06945 WP_002946409.1 1328009..1328935(-) (amiD) [Streptococcus thermophilus strain CNRZ760]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=510317 STCNRZ760_RS06945 WP_002946409.1 1328009..1328935(-) (amiD) [Streptococcus thermophilus strain CNRZ760]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGATTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964