Detailed information NTG0510315

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: STCNRZ760_RS06935
• Genome accession: NZ_CP065482
• Coordinates: 1325992..1326921 (-)
• Length: 309 a.a.
• NCBI ID: WP_002951426.1
• Uniprot ID: A0A7U7CIU5
• Organism: Streptococcus thermophilus strain CNRZ760
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1320992..1331921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ760_RS06910 (STCNRZ760_06855)	-	1322276..1323094 (-)	819	WP_011681411.1	Cof-type HAD-IIB family hydrolase	-
STCNRZ760_RS06915 (STCNRZ760_06860)	-	1323087..1323881 (-)	795	WP_180481058.1	HAD family hydrolase	-
STCNRZ760_RS06920 (STCNRZ760_06865)	-	1324065..1324442 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
STCNRZ760_RS06925 (STCNRZ760_06870)	-	1324447..1325145 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
STCNRZ760_RS06930 (STCNRZ760_06875)	-	1325157..1325942 (+)	786	WP_176243303.1	ABC transporter permease	-
STCNRZ760_RS06935 (STCNRZ760_06880)	amiF	1325992..1326921 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
STCNRZ760_RS06940 (STCNRZ760_06885)	amiE	1326914..1327999 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
STCNRZ760_RS06945 (STCNRZ760_06890)	amiD	1328009..1328935 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
STCNRZ760_RS06950 (STCNRZ760_06895)	amiC	1328935..1330428 (-)	1494	WP_002946410.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 35171.28 Da
• Isoelectric Point: 6.5989

>NTDB_id=510315 STCNRZ760_RS06935 WP_002951426.1 1325992..1326921(-) (amiF) [Streptococcus thermophilus strain CNRZ760]
MPEKLVEVKDVEISFGEGRKKFVAVHNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSNGEIIFDGKKINGYLSHS
EKNDLIRRIQMIFQDPAASLNERATVDYILSEGLYNFHLYKDEEERKAKIKEIIKEVGLLEEHLTRYPHEFSGGQRQRIG
IARSLVMQPDLVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGTIVEVAETEELYN
NPIHPYTKSLLSAVPIPDPILERKKVLKVYDPNQHDYSVDKPEMVEVRPGHFVWGNKTEIETYRKEQSK

Nucleotide

• Length: 930 bp

>NTDB_id=510315 STCNRZ760_RS06935 WP_002951426.1 1325992..1326921(-) (amiF) [Streptococcus thermophilus strain CNRZ760]
ATGCCTGAGAAATTAGTTGAAGTAAAAGATGTGGAAATTTCCTTCGGCGAAGGAAGAAAGAAGTTCGTTGCTGTCCACAA
TGCTAATTTTTTCATCAACAAGGGTGAAACCTTCTCCCTCGTTGGTGAGTCTGGTAGTGGTAAAACGACTATTGGACGTG
CCATTATCGGTTTAAATGACACAAGTAATGGTGAGATTATTTTTGACGGTAAGAAGATCAATGGATACTTATCTCACTCT
GAGAAAAACGACCTTATCCGTCGTATTCAGATGATTTTCCAAGACCCCGCGGCTAGTTTGAATGAACGTGCGACAGTCGA
TTATATCTTGTCTGAGGGCTTGTACAATTTCCATCTTTATAAAGATGAGGAAGAACGTAAGGCTAAAATCAAGGAAATCA
TCAAAGAAGTAGGACTTCTTGAGGAGCACTTAACACGTTACCCTCACGAATTTTCTGGGGGACAACGTCAACGTATCGGG
ATTGCGCGTTCTTTGGTCATGCAGCCTGATTTGGTTATCGCTGATGAACCAATCTCAGCCCTTGACGTGTCAGTTCGTGC
CCAAGTTTTGAATTTGCTTAAGAAATTCCAAAAAGAGTTGGGGTTAACCTATCTCTTTATCGCTCACGATTTGTCAGTGG
TCCGTTTCATTTCTGACCGTATCGCTGTTATCTATAAGGGGACAATCGTGGAAGTTGCTGAGACAGAAGAGCTCTACAAC
AATCCTATCCATCCTTACACCAAGTCACTCTTGTCTGCTGTTCCTATTCCAGATCCAATCTTGGAACGTAAGAAAGTCTT
GAAGGTTTATGATCCAAACCAACACGACTATTCGGTTGATAAACCAGAAATGGTGGAAGTACGCCCAGGTCACTTCGTTT
GGGGTAACAAGACAGAAATTGAGACTTATCGTAAAGAACAAAGTAAGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (26-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

3D structure

• AlphaFold DB: A0A7U7CIU5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	100	100	1
amiF	Streptococcus thermophilus LMD-9	99.676	100	0.997
amiF	Streptococcus salivarius strain HSISS4	98.058	100	0.981