Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SCR2_RS07880 Genome accession   NC_022245
Coordinates   1576710..1577168 (-) Length   152 a.a.
NCBI ID   WP_006268244.1    Uniprot ID   F9P7G4
Organism   Streptococcus constellatus subsp. pharyngis C818     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1571710..1582168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCR2_RS07860 (SCR2_1546) - 1572346..1572666 (-) 321 WP_003031767.1 PTS cellobiose transporter subunit IIA -
  SCR2_RS07865 (SCR2_1547) - 1572677..1572991 (-) 315 WP_003031794.1 PTS cellobiose transporter subunit IIB -
  SCR2_RS07870 (SCR2_1548) rcrQ 1573201..1574961 (-) 1761 WP_020998020.1 ABC transporter ATP-binding protein Regulator
  SCR2_RS07875 (SCR2_1549) rcrP 1574951..1576717 (-) 1767 WP_006268071.1 ABC transporter ATP-binding protein Regulator
  SCR2_RS07880 (SCR2_1550) rcrR 1576710..1577168 (-) 459 WP_006268244.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SCR2_RS07885 (SCR2_1551) - 1577289..1578476 (-) 1188 WP_006268214.1 NADH-dependent flavin oxidoreductase -
  SCR2_RS07890 (SCR2_1552) - 1578743..1579153 (-) 411 WP_006268326.1 peptide deformylase -
  SCR2_RS07895 (SCR2_1553) scrK 1579219..1580118 (-) 900 WP_020998021.1 fructokinase ScrK -
  SCR2_RS07900 (SCR2_1554) - 1580258..1582156 (-) 1899 WP_020998022.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17779.74 Da        Isoelectric Point: 9.0750

>NTDB_id=51030 SCR2_RS07880 WP_006268244.1 1576710..1577168(-) (rcrR) [Streptococcus constellatus subsp. pharyngis C818]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCGKMTFIKDIEQELGITKSVASNLMKRMVRNGL
IYLEVSEADKRAKIIRLTSESKERMNKIRDFFDEMDRCLLTGISEEDLVTFFQIMGRFYQNIEKLEKGEANG

Nucleotide


Download         Length: 459 bp        

>NTDB_id=51030 SCR2_RS07880 WP_006268244.1 1576710..1577168(-) (rcrR) [Streptococcus constellatus subsp. pharyngis C818]
ATGGAAAAACCATTATTGGAATTCAAGCGATTTGGACGGAAGACACATCTGATGATTCAAAAAATTGCCAAAGAGCGAGG
GATTGAATTTATGGCGGGTCCACAAGGGCAGGTATTGCATTTTGTGAATCATCGAGAAGATTGTGGCAAGATGACCTTTA
TTAAAGATATTGAGCAGGAATTGGGAATTACCAAGTCAGTTGCTAGTAATTTAATGAAGCGAATGGTTAGAAATGGCTTG
ATTTATCTGGAAGTGAGTGAAGCAGATAAACGCGCTAAGATTATTCGTTTGACATCGGAATCAAAAGAGCGCATGAATAA
AATTCGGGATTTCTTTGATGAGATGGATCGCTGCTTATTGACTGGCATTTCAGAAGAAGATTTGGTGACTTTTTTTCAAA
TAATGGGGCGATTTTATCAGAATATTGAAAAATTAGAAAAAGGAGAAGCGAATGGTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P7G4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

41.781

96.053

0.401

Multiple sequence alignment