Detailed information NTG0510199

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ST90729_RS06855
• Genome accession: NZ_CP065480
• Coordinates: 1329090..1330016 (-)
• Length: 308 a.a.
• NCBI ID: WP_002946409.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 90729
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1324090..1335016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ST90729_RS06825 (ST90729_06805)	-	1324168..1324962 (-)	795	WP_084829753.1	HAD family hydrolase	-
ST90729_RS06830 (ST90729_06810)	-	1325146..1325523 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
ST90729_RS06835 (ST90729_06815)	-	1325528..1326226 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
ST90729_RS06840 (ST90729_06820)	-	1326238..1327023 (+)	786	WP_002951425.1	hypothetical protein	-
ST90729_RS06845 (ST90729_06825)	amiF	1327073..1328002 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
ST90729_RS06850 (ST90729_06830)	amiE	1327995..1329080 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
ST90729_RS06855 (ST90729_06835)	amiD	1329090..1330016 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
ST90729_RS06860 (ST90729_06840)	amiC	1330016..1331509 (-)	1494	WP_011227407.1	ABC transporter permease	Regulator
ST90729_RS06865 (ST90729_06845)	amiA	1331571..1333538 (-)	1968	WP_347116470.1	peptide ABC transporter substrate-binding protein	Regulator
ST90729_RS06870 (ST90729_06850)	-	1333742..1333932 (-)	191	Protein_1298	IS3 family transposase	-
ST90729_RS06875	-	1333926..1334327 (-)	402	Protein_1299	ABC transporter ATP-binding protein	-
ST90729_RS06880 (ST90729_06865)	-	1334322..1334682 (-)	361	Protein_1300	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34694.85 Da
• Isoelectric Point: 9.7054

>NTDB_id=510199 ST90729_RS06855 WP_002946409.1 1329090..1330016(-) (amiD) [Streptococcus thermophilus strain 90729]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=510199 ST90729_RS06855 WP_002946409.1 1329090..1330016(-) (amiD) [Streptococcus thermophilus strain 90729]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	100	100	1
amiD	Streptococcus thermophilus LMD-9	100	100	1
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964