Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SCR2_RS05670 Genome accession   NC_022245
Coordinates   1140155..1140958 (-) Length   267 a.a.
NCBI ID   WP_006268738.1    Uniprot ID   F9P8V3
Organism   Streptococcus constellatus subsp. pharyngis C818     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1135155..1145958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCR2_RS05660 (SCR2_1115) smc 1135437..1138970 (-) 3534 WP_020997875.1 chromosome segregation protein SMC -
  SCR2_RS05665 (SCR2_1116) rnc 1138961..1139659 (-) 699 WP_003068697.1 ribonuclease III -
  SCR2_RS10000 - 1139795..1140060 (-) 266 Protein_1115 YbaN family protein -
  SCR2_RS05670 (SCR2_1117) vicX 1140155..1140958 (-) 804 WP_006268738.1 MBL fold metallo-hydrolase Regulator
  SCR2_RS05675 (SCR2_1118) micB 1140960..1142312 (-) 1353 WP_006268651.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SCR2_RS05680 (SCR2_1119) yycF 1142305..1143006 (-) 702 WP_003035055.1 response regulator YycF -
  SCR2_RS05685 (SCR2_1120) - 1143307..1143639 (-) 333 WP_006268722.1 hypothetical protein -
  SCR2_RS05690 (SCR2_1121) - 1143666..1144979 (-) 1314 WP_006268747.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29825.78 Da        Isoelectric Point: 6.0342

>NTDB_id=51013 SCR2_RS05670 WP_006268738.1 1140155..1140958(-) (vicX) [Streptococcus constellatus subsp. pharyngis C818]
MSEKGFKYSILASGSTGNCFYLETPKKRLLIDAGLSGKKITSLLSEIGRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHICDTSPDTATPLTDI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=51013 SCR2_RS05670 WP_006268738.1 1140155..1140958(-) (vicX) [Streptococcus constellatus subsp. pharyngis C818]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTAGCATCGGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAGGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACCAGCTTATTGAGTGAGATTGGCCGCAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCACGAGCATAAGGATCATATCCACGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAAATTGATGTCAGTCAGAAGCATATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGGGTCAGTCATGATGCGGTTGCGCCGCAATTTT
ACCGATTGATGAAGGATGATAAGAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCAGGGATTATT
GAAAATGCGGACGGGTATTTGATTGAGTCTAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGTCTGAA
GCAACGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGTCATCTTAGCAAAGAAAACAATACCAAAGAATTGGCTCATATCACAATGGTCAATCAATTG
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCAGATACGGCAACTCCATTGACTGATAT
TTAG

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P8V3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816

Multiple sequence alignment