Detailed information NTG0050952

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SAIN_RS09370
• Genome accession: NC_022244
• Coordinates: 1895553..1896650 (+)
• Length: 365 a.a.
• NCBI ID: WP_003026800.1
• Uniprot ID: -
• Organism: Streptococcus anginosus C1051
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1890553..1901650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAIN_RS09345 (SAIN_1819)	pgsA	1891023..1891562 (-)	540	WP_021002239.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SAIN_RS09350 (SAIN_1820)	rodZ	1891573..1892394 (-)	822	WP_021002240.1	cytoskeleton protein RodZ	-
SAIN_RS09355 (SAIN_1821)	yfmH	1892453..1893748 (-)	1296	WP_021002241.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SAIN_RS09360 (SAIN_1822)	yfmF	1893748..1894995 (-)	1248	WP_021002242.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SAIN_RS09365 (SAIN_1823)	yaaA	1895171..1895551 (+)	381	WP_003026797.1	S4 domain-containing protein YaaA	-
SAIN_RS09370 (SAIN_1824)	recF	1895553..1896650 (+)	1098	WP_003026800.1	DNA replication/repair protein RecF	Machinery gene
SAIN_RS09375 (SAIN_1825)	guaB	1896739..1898220 (-)	1482	WP_003026802.1	IMP dehydrogenase	-
SAIN_RS09380 (SAIN_1826)	trpS	1898352..1899377 (-)	1026	WP_003026805.1	tryptophan--tRNA ligase	-
SAIN_RS09385 (SAIN_1827)	galE	1899459..1900454 (-)	996	WP_003026807.1	UDP-glucose 4-epimerase GalE	-
SAIN_RS09390 (SAIN_1828)	-	1900474..1901163 (-)	690	WP_003026808.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41979.26 Da
• Isoelectric Point: 8.4522

>NTDB_id=50952 SAIN_RS09370 WP_003026800.1 1895553..1896650(+) (recF) [Streptococcus anginosus C1051]
MWLKNLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGN
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVVLFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTMDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENLTIKYCSSVPLSDSNKLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQSMPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=50952 SAIN_RS09370 WP_003026800.1 1895553..1896650(+) (recF) [Streptococcus anginosus C1051]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAACGCTCAAGGAAAAACAAATATCTTGGAAGCTATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGATACCCTGAAAATATCTGGACAACTTGTCAAACAAACTGGAAAT
ATTTCTTTGGAAATTGACTTGACACCTAAAGGAAGAATTACAAAAGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTGTTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAACCAATCTATTTATCTGATTTATCACATTACCACCATGTCTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATGGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTAGAGTTTGGTTG
TCGTGTTATGCAGCATAGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGTCAACAAAAACATTTGGAACTCTCAAGTC
ATTTAGAAAACTTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAAGTTAAAAGAATCTTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGCGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAGCATGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGGCATCTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.346	98.082	0.71
recF	Bacillus subtilis subsp. subtilis str. 168	47.701	95.342	0.455