Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I5818_RS17400 Genome accession   NZ_CP065424
Coordinates   3488502..3488684 (-) Length   60 a.a.
NCBI ID   WP_058004798.1    Uniprot ID   A0A8E2I4W4
Organism   Heyndrickxia oleronia strain DSM 9356     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3483502..3493684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5818_RS17380 (I5818_17390) - 3484499..3485290 (-) 792 WP_079991289.1 DUF2268 domain-containing protein -
  I5818_RS17385 (I5818_17395) fabF 3485483..3486718 (-) 1236 WP_071976850.1 beta-ketoacyl-ACP synthase II -
  I5818_RS17390 (I5818_17400) - 3486858..3487796 (-) 939 WP_058004800.1 beta-ketoacyl-ACP synthase III -
  I5818_RS17395 (I5818_17405) - 3488058..3488375 (+) 318 WP_058004799.1 hypothetical protein -
  I5818_RS17400 (I5818_17410) comZ 3488502..3488684 (-) 183 WP_058004798.1 ComZ family protein Regulator
  I5818_RS17405 (I5818_17415) med 3488712..3489659 (-) 948 WP_058004797.1 BMP family ABC transporter substrate-binding protein Regulator
  I5818_RS17410 (I5818_17420) - 3489772..3490563 (-) 792 WP_071976848.1 hypothetical protein -
  I5818_RS17415 (I5818_17425) - 3490694..3491410 (-) 717 WP_071976847.1 alpha/beta fold hydrolase -
  I5818_RS17420 (I5818_17430) - 3491669..3491851 (+) 183 WP_058004794.1 YjzD family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7006.16 Da        Isoelectric Point: 4.3189

>NTDB_id=509401 I5818_RS17400 WP_058004798.1 3488502..3488684(-) (comZ) [Heyndrickxia oleronia strain DSM 9356]
MNQDKSMEFMQIAMKYLPEAKEKLDQAGVEISFELLQPFMELFTKVMNEAYELGKNDALK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=509401 I5818_RS17400 WP_058004798.1 3488502..3488684(-) (comZ) [Heyndrickxia oleronia strain DSM 9356]
ATGAATCAAGACAAATCGATGGAATTTATGCAAATAGCAATGAAATACTTACCAGAGGCAAAAGAAAAATTGGATCAAGC
AGGAGTGGAGATTTCCTTTGAATTGCTTCAACCTTTTATGGAATTATTCACTAAGGTGATGAATGAAGCGTATGAGCTTG
GAAAAAATGATGCATTAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

68.966

96.667

0.667