Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KU510_RS10390 Genome accession   NZ_CP077861
Coordinates   2116713..2117684 (+) Length   323 a.a.
NCBI ID   WP_000876318.1    Uniprot ID   A0A0H2XIG1
Organism   Staphylococcus aureus strain 372     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2111713..2122684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU510_RS10370 (KU510_10325) nrdF 2112842..2113813 (+) 972 WP_000562499.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  KU510_RS10375 (KU510_10330) istA 2114303..2115595 (+) 1293 WP_000777467.1 IS21 family transposase -
  KU510_RS10380 (KU510_10335) istB 2115588..2116349 (+) 762 WP_001066124.1 IS21-like element helper ATPase IstB -
  KU510_RS10385 (KU510_10340) - 2116519..2116674 (+) 156 WP_000499195.1 hypothetical protein -
  KU510_RS10390 (KU510_10345) ceuB 2116713..2117684 (+) 972 WP_000876318.1 ABC transporter permease Machinery gene
  KU510_RS10395 (KU510_10350) - 2117671..2118627 (+) 957 WP_001245572.1 iron chelate uptake ABC transporter family permease subunit -
  KU510_RS10400 (KU510_10355) - 2118624..2119385 (+) 762 WP_000616873.1 ABC transporter ATP-binding protein -
  KU510_RS10405 (KU510_10360) - 2119504..2120532 (+) 1029 WP_000754461.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  KU510_RS10410 (KU510_10365) - 2120849..2121163 (-) 315 WP_001127269.1 CHY zinc finger protein -
  KU510_RS10415 (KU510_10370) murB 2121181..2122104 (-) 924 WP_000608440.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35582.13 Da        Isoelectric Point: 10.1194

>NTDB_id=508893 KU510_RS10390 WP_000876318.1 2116713..2117684(+) (ceuB) [Staphylococcus aureus strain 372]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=508893 KU510_RS10390 WP_000876318.1 2116713..2117684(+) (ceuB) [Staphylococcus aureus strain 372]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTTATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAGTCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGCAGTATTTGCGGTACGTTTTTATTTGTTAAAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTGCCGCTTTTAGGAATTATGATGGGGGGGATTGTTGCAAGTTTCACAACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTAGTAGTAGTG
ACTGTTGGAACATTACCGTTCTTAGGACTAGTAATACCAAATATTATTTCAATTTATCGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XIG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471