Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   I0292_RS11950 Genome accession   NZ_CP065335
Coordinates   2242261..2243211 (+) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia megaterium strain Y11     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2237261..2248211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I0292_RS11920 (I0292_11840) lepB 2237436..2237996 (+) 561 WP_098112348.1 signal peptidase I -
  I0292_RS11925 (I0292_11845) - 2238232..2238795 (+) 564 WP_098112347.1 NAD(P)H-dependent oxidoreductase -
  I0292_RS11930 (I0292_11850) - 2239352..2239537 (+) 186 WP_014459286.1 hypothetical protein -
  I0292_RS11935 (I0292_11855) - 2240028..2240192 (+) 165 WP_013057894.1 hypothetical protein -
  I0292_RS11940 (I0292_11860) - 2240274..2240528 (-) 255 WP_013057893.1 hypothetical protein -
  I0292_RS11945 (I0292_11865) - 2240891..2241697 (+) 807 WP_099331136.1 cell wall hydrolase -
  I0292_RS11950 (I0292_11870) ceuB 2242261..2243211 (+) 951 WP_028414467.1 ABC transporter permease Machinery gene
  I0292_RS11955 (I0292_11875) - 2243204..2244151 (+) 948 WP_034267834.1 iron chelate uptake ABC transporter family permease subunit -
  I0292_RS11960 (I0292_11880) - 2244145..2244903 (+) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  I0292_RS11965 (I0292_11885) - 2244927..2245883 (+) 957 WP_028414464.1 siderophore ABC transporter substrate-binding protein -
  I0292_RS11970 (I0292_11890) - 2245927..2246193 (+) 267 Protein_2287 manganese catalase family protein -
  I0292_RS11975 (I0292_11895) - 2246456..2246596 (+) 141 WP_014459290.1 hypothetical protein -
  I0292_RS11980 (I0292_11900) - 2247065..2248144 (-) 1080 WP_099331135.1 PrsW family intramembrane metalloprotease -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=508545 I0292_RS11950 WP_028414467.1 2242261..2243211(+) (ceuB) [Priestia megaterium strain Y11]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=508545 I0292_RS11950 WP_028414467.1 2242261..2243211(+) (ceuB) [Priestia megaterium strain Y11]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGGTTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCCAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497