Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I2439_RS07245 Genome accession   NZ_CP065191
Coordinates   1524329..1525138 (-) Length   269 a.a.
NCBI ID   WP_021320992.1    Uniprot ID   A0AAW3GKW3
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ46     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1519329..1530138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2439_RS07235 (HIEAAJJG_01467) - 1520443..1522374 (+) 1932 WP_042670951.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -
  I2439_RS07240 (HIEAAJJG_01468) - 1522395..1524065 (-) 1671 WP_255313971.1 restriction endonuclease FokI C-terminal domain-containing protein -
  I2439_RS07245 (HIEAAJJG_01470) vicX 1524329..1525138 (-) 810 WP_021320992.1 MBL fold metallo-hydrolase Regulator
  I2439_RS07250 (HIEAAJJG_01471) vicK 1525142..1526494 (-) 1353 WP_014623188.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I2439_RS07255 (HIEAAJJG_01472) vicR 1526487..1527197 (-) 711 WP_012677635.1 response regulator YycF Regulator
  I2439_RS07260 (HIEAAJJG_01473) - 1527406..1528422 (-) 1017 WP_043039171.1 DUF3114 domain-containing protein -
  I2439_RS07265 (HIEAAJJG_01474) - 1528468..1529730 (-) 1263 WP_043039172.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30011.07 Da        Isoelectric Point: 5.5344

>NTDB_id=507832 I2439_RS07245 WP_021320992.1 1524329..1525138(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ46]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=507832 I2439_RS07245 WP_021320992.1 1524329..1525138(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ46]
ATGAGTGAGGTTGGTTTTAAATATAGTATTTTAGCATCAGGATCGACAGGTAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACCAGTCTCCTTGCTGAGATTGACAGAAGACCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTATCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCTGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751