Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SMULJ23_RS07995 Genome accession   NC_017768
Coordinates   1652725..1653450 (-) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans LJ23     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1647725..1658450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMULJ23_RS07960 (SMULJ23_1560) - 1647896..1648192 (-) 297 WP_002263922.1 YlxR family protein -
  SMULJ23_RS07965 (SMULJ23_1561) nusA 1648210..1649403 (-) 1194 WP_002280995.1 transcription termination factor NusA -
  SMULJ23_RS07970 (SMULJ23_1562) rimP 1649439..1649930 (-) 492 WP_002262604.1 ribosome maturation factor RimP -
  SMULJ23_RS07980 (SMULJ23_1563) trmB 1650202..1650837 (-) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SMULJ23_RS07985 (SMULJ23_1564) - 1650847..1651629 (-) 783 WP_014678196.1 phosphotransferase family protein -
  SMULJ23_RS07990 (SMULJ23_1565) pptB 1651688..1652722 (-) 1035 WP_002267541.1 ABC transporter permease Regulator
  SMULJ23_RS07995 (SMULJ23_1566) pptA 1652725..1653450 (-) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  SMULJ23_RS08000 (SMULJ23_1567) - 1653515..1653934 (+) 420 WP_002262609.1 HIT family protein -
  SMULJ23_RS08005 (SMULJ23_1568) - 1653931..1654215 (+) 285 WP_002262610.1 hypothetical protein -
  SMULJ23_RS08010 (SMULJ23_1569) brpA 1654388..1655608 (-) 1221 WP_014678197.1 biofilm formation/cell division transcriptional regulator BrpA -
  SMULJ23_RS08015 (SMULJ23_1570) tsaE 1655939..1656382 (-) 444 WP_002265162.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SMULJ23_RS08020 (SMULJ23_1571) - 1656511..1657941 (-) 1431 WP_002267778.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=50778 SMULJ23_RS07995 WP_002262608.1 1652725..1653450(-) (pptA) [Streptococcus mutans LJ23]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=50778 SMULJ23_RS07995 WP_002262608.1 1652725..1653450(-) (pptA) [Streptococcus mutans LJ23]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAATATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCCTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759

Multiple sequence alignment