Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I2438_RS07290 Genome accession   NZ_CP065190
Coordinates   1495393..1496202 (-) Length   269 a.a.
NCBI ID   WP_021320992.1    Uniprot ID   A0AAW3GKW3
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ36     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490393..1501202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2438_RS07280 (HCFMJIKG_01444) rnc 1492048..1492740 (-) 693 WP_037581642.1 ribonuclease III -
  I2438_RS07285 (HCFMJIKG_01445) - 1492999..1494513 (-) 1515 WP_021320991.1 helix-turn-helix domain-containing protein -
  I2438_RS07290 (HCFMJIKG_01446) vicX 1495393..1496202 (-) 810 WP_021320992.1 MBL fold metallo-hydrolase Regulator
  I2438_RS07295 (HCFMJIKG_01447) vicK 1496206..1497558 (-) 1353 WP_012677636.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I2438_RS07300 (HCFMJIKG_01448) vicR 1497551..1498261 (-) 711 WP_012515994.1 response regulator YycF Regulator
  I2438_RS07305 (HCFMJIKG_01449) - 1498470..1499486 (-) 1017 WP_014623189.1 DUF3114 domain-containing protein -
  I2438_RS07310 (HCFMJIKG_01450) - 1499532..1500794 (-) 1263 WP_014623190.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30011.07 Da        Isoelectric Point: 5.5344

>NTDB_id=507772 I2438_RS07290 WP_021320992.1 1495393..1496202(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=507772 I2438_RS07290 WP_021320992.1 1495393..1496202(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGATCGACAGGGAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACTAGTCTCCTTGCTGAGATTGACAGAAGGCCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTATCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCTGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751