Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SANR_RS04815 Genome accession   NC_022239
Coordinates   972525..972995 (+) Length   156 a.a.
NCBI ID   WP_003031692.1    Uniprot ID   F9P5V6
Organism   Streptococcus anginosus C238     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 967525..977995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS04800 (SANR_0942) - 969630..970322 (+) 693 WP_020999586.1 DUF805 domain-containing protein -
  SANR_RS04805 (SANR_0943) - 970827..971813 (+) 987 WP_003034384.1 Gfo/Idh/MocA family protein -
  SANR_RS04810 (SANR_0944) - 971835..972488 (+) 654 WP_003034489.1 uracil-DNA glycosylase -
  SANR_RS04815 (SANR_0945) mutX 972525..972995 (+) 471 WP_003031692.1 NUDIX hydrolase Machinery gene
  SANR_RS04820 (SANR_0946) - 973008..974285 (+) 1278 WP_003034545.1 dihydroorotase -
  SANR_RS04825 (SANR_0947) metK 974552..975742 (+) 1191 WP_003034546.1 methionine adenosyltransferase -
  SANR_RS04830 (SANR_0948) - 976159..977418 (+) 1260 WP_003034537.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18052.50 Da        Isoelectric Point: 4.7883

>NTDB_id=50748 SANR_RS04815 WP_003031692.1 972525..972995(+) (mutX) [Streptococcus anginosus C238]
MVKLATICYIDNGKEFLLLHRNKKPNDVHAGKWIGVGGKLEKGETPQECAVREIFEETGLRVNKPVLKGIITFPDFTPNH
DWYTYVFKVTEFEGDLIDCDEGTLEWVPYEQVLSKPTWEGDHTFLSWILEDKPFFSAKFSYKGEKLVESHVDFYGE

Nucleotide


Download         Length: 471 bp        

>NTDB_id=50748 SANR_RS04815 WP_003031692.1 972525..972995(+) (mutX) [Streptococcus anginosus C238]
ATGGTTAAGTTAGCAACGATTTGCTATATTGACAACGGCAAAGAATTTTTATTGCTACATCGAAATAAAAAGCCTAATGA
TGTTCATGCTGGTAAGTGGATTGGTGTTGGGGGTAAATTAGAGAAAGGTGAAACGCCGCAGGAGTGCGCTGTAAGAGAAA
TCTTTGAAGAAACAGGTTTGCGGGTCAATAAGCCAGTATTAAAAGGTATTATCACGTTTCCAGATTTTACACCTAACCAT
GATTGGTATACCTATGTATTTAAAGTGACGGAGTTTGAGGGAGACTTGATTGACTGCGATGAGGGGACTTTGGAATGGGT
GCCTTATGAACAAGTTTTGTCCAAACCAACTTGGGAGGGAGATCATACGTTTCTATCTTGGATTTTAGAAGATAAACCAT
TCTTCTCGGCTAAATTTTCTTACAAAGGAGAGAAGTTGGTGGAGAGTCATGTTGATTTTTATGGAGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P5V6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.818

98.718

0.808

Multiple sequence alignment