Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   KQY30_RS14830 Genome accession   NZ_CP077658
Coordinates   3523839..3524963 (+) Length   374 a.a.
NCBI ID   WP_046507681.1    Uniprot ID   -
Organism   Streptomyces sp. GMY02     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3518839..3529963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQY30_RS14815 (KQY30_14815) - 3519260..3520099 (+) 840 WP_217307217.1 hypothetical protein -
  KQY30_RS14820 (KQY30_14820) - 3520254..3522184 (-) 1931 Protein_2978 hypothetical protein -
  KQY30_RS14825 (KQY30_14825) radA/sms 3522385..3523794 (+) 1410 WP_217307219.1 DNA repair protein RadA Machinery gene
  KQY30_RS14830 (KQY30_14830) disA 3523839..3524963 (+) 1125 WP_046507681.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  KQY30_RS14835 (KQY30_14835) - 3525216..3526169 (-) 954 WP_217307220.1 hypothetical protein -
  KQY30_RS14840 (KQY30_14840) - 3526537..3527553 (+) 1017 WP_254407130.1 A/G-specific adenine glycosylase -
  KQY30_RS14845 (KQY30_14845) - 3527757..3528452 (+) 696 WP_217307221.1 SigE family RNA polymerase sigma factor -
  KQY30_RS14850 (KQY30_14850) - 3528545..3529156 (+) 612 WP_217307222.1 hypothetical protein -
  KQY30_RS14855 (KQY30_14855) cseB 3529168..3529878 (+) 711 WP_217307223.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40235.03 Da        Isoelectric Point: 4.9406

>NTDB_id=506783 KQY30_RS14830 WP_046507681.1 3523839..3524963(+) (disA) [Streptomyces sp. GMY02]
MAANDRASAPGKSGAGSGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPESSIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERDLVARDYVPEPTAKRARTVDEALGELDSLTHSELLELPTVARALGYSGAPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=506783 KQY30_RS14830 WP_046507681.1 3523839..3524963(+) (disA) [Streptomyces sp. GMY02]
GTGGCAGCCAACGACCGGGCATCAGCACCCGGAAAGTCCGGCGCGGGCTCCGGCAACGAAGCGCTGATGCGCGCCTCCCT
GAGCGCGGTCGCGCCGGGTACGGCCCTGCGCGACGGGCTGGAGCGGATCCTGCGCGGAAACACCGGCGGTCTGATCGTCC
TGGGCATGGACAAGACCGTCGAATCGATGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTCCAGTTGGTCCC
CGAGTCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGGGTGTCCAAGCAGTGCGGCTTCCCGG
TGGTCTCCGTGTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGAACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCC
ATCCTGTCCCGGGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACTTGGTGACGGTCCGCGATGTGACGGCCGTCGCGCAGCGGCTGGAGATGGTGCGCAGGATCG
CCACGGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGACGGCTTCTCTCACTCCAGCTCGACGAGTTGATCGCG
GGTGTGGAGCCGGAGCGGGATCTGGTCGCACGCGACTATGTGCCGGAGCCGACCGCGAAGCGGGCCCGTACGGTCGACGA
GGCACTCGGCGAGCTGGACTCGCTGACCCACTCCGAGCTGCTCGAACTGCCCACCGTGGCACGGGCGCTGGGGTACAGCG
GGGCACCGGAGACACTCGACTCCGCGGTCTCGCCGCGGGGTTACCGGCTGCTGGCGAAGGTGCCACGGCTGCCCGGCGCC
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCGAGTGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAAGCGCGGGCACGCAGCGTGCGGGAGGGTCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436