Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   KRR37_RS13665 Genome accession   NZ_CP077652
Coordinates   3085327..3086451 (+) Length   374 a.a.
NCBI ID   WP_028416141.1    Uniprot ID   A0ABY2P794
Organism   Streptomyces sp. HNA39     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3080327..3091451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRR37_RS13650 (KRR37_13570) - 3080640..3081482 (+) 843 WP_127465744.1 hypothetical protein -
  KRR37_RS13655 (KRR37_13575) - 3081616..3083634 (-) 2019 WP_248870645.1 hypothetical protein -
  KRR37_RS13660 (KRR37_13580) radA/sms 3083824..3085245 (+) 1422 WP_112491152.1 DNA repair protein RadA Machinery gene
  KRR37_RS13665 (KRR37_13585) disA 3085327..3086451 (+) 1125 WP_028416141.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  KRR37_RS13670 (KRR37_13590) - 3086898..3087734 (-) 837 WP_206304474.1 hypothetical protein -
  KRR37_RS13675 (KRR37_13595) - 3087986..3088915 (+) 930 WP_217688500.1 A/G-specific adenine glycosylase -
  KRR37_RS13680 (KRR37_13600) - 3089107..3089874 (+) 768 WP_248870647.1 SigE family RNA polymerase sigma factor -
  KRR37_RS13685 (KRR37_13605) - 3090054..3090704 (+) 651 WP_127465748.1 hypothetical protein -
  KRR37_RS13690 (KRR37_13610) cseB 3090723..3091436 (+) 714 WP_127465749.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40306.25 Da        Isoelectric Point: 4.9406

>NTDB_id=506712 KRR37_RS13665 WP_028416141.1 3085327..3086451(+) (disA) [Streptomyces sp. HNA39]
MAANDRAAAPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=506712 KRR37_RS13665 WP_028416141.1 3085327..3086451(+) (disA) [Streptomyces sp. HNA39]
GTGGCAGCCAACGACCGGGCGGCAGCGCCCGGAAAGTCCGGCCAAGGCACCGGCAACGAAGCGCTGATGCGCGCCTCGTT
GAGCGCGGTAGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGCATGGACAAGACCGTCGAGTCGATGTGTACCGGCGGGTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGGGTGCAGCTGGTCCC
GGACGCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTCTCCCGGGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTGGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CCACCGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGCCGGCTCCTCTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGGGAGCTGGTGGTCCGGGACTATGTGCCCGAGCCGACGGCGAAACGGTCGCGCACGGTGGCGGA
GGCGCTGACGGAGCTGGACTCGCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGGTACAGCG
GCTCGCCGGAGACGCTGGACTCGGCGGTCTCGCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCCAGCGTGGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGGCTCTCACGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436