Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I2437_RS03030 Genome accession   NZ_CP065061
Coordinates   597272..598081 (+) Length   269 a.a.
NCBI ID   WP_206157948.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ33     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 592272..603081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2437_RS03010 (IEMOCGPF_00596) - 592681..593943 (+) 1263 WP_043053280.1 AMP-binding protein -
  I2437_RS03015 (IEMOCGPF_00597) - 593988..595004 (+) 1017 WP_042671148.1 DUF3114 domain-containing protein -
  I2437_RS03020 (IEMOCGPF_00598) vicR 595213..595923 (+) 711 WP_012515994.1 response regulator YycF Regulator
  I2437_RS03025 (IEMOCGPF_00599) vicK 595916..597268 (+) 1353 WP_014623188.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I2437_RS03030 (IEMOCGPF_00600) vicX 597272..598081 (+) 810 WP_206157948.1 MBL fold metallo-hydrolase Regulator
  I2437_RS03035 (IEMOCGPF_00601) - 598272..600014 (+) 1743 WP_012677638.1 restriction endonuclease FokI C-terminal domain-containing protein -
  I2437_RS03040 (IEMOCGPF_00602) - 600035..601966 (-) 1932 WP_206157949.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29981.05 Da        Isoelectric Point: 5.5344

>NTDB_id=506600 I2437_RS03030 WP_206157948.1 597272..598081(+) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
MSEVGFKYSILASGSTGNCFYLETPKRRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVAQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=506600 I2437_RS03030 WP_206157948.1 597272..598081(+) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGGTCGACAGGTAACTGCTTTTACTTGGAAACGCCCAAGAG
GCGATTGTTGATTGATGCAGGGCTGACTGGCAAGAAAATCACCAGTCTCCTTGCTGAGATTGATAGAAAGCCTGAGGATT
TAGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGCGTTGGAATCATGGCTCGAAAATATAACCTAGAC
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGTAACCTAGACGTCGCACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTACCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGATACCTCACCAGATACCGCCTGCCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751