Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | SCI_RS08590 | Genome accession | NC_022238 |
| Coordinates | 1742009..1743280 (+) | Length | 423 a.a. |
| NCBI ID | WP_006268554.1 | Uniprot ID | F9P7T9 |
| Organism | Streptococcus constellatus subsp. pharyngis C1050 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1737009..1748280
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCI_RS10730 | - | 1738451..1738597 (-) | 147 | WP_006268140.1 | hypothetical protein | - |
| SCI_RS08565 (SCI_1678) | - | 1738764..1739504 (-) | 741 | WP_020998051.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| SCI_RS08570 (SCI_1679) | prmA | 1739505..1740458 (-) | 954 | WP_006267983.1 | 50S ribosomal protein L11 methyltransferase | - |
| SCI_RS08575 (SCI_1680) | - | 1740474..1740944 (-) | 471 | WP_006268202.1 | GNAT family N-acetyltransferase | - |
| SCI_RS08580 (SCI_1681) | - | 1740941..1741387 (-) | 447 | WP_006268439.1 | NUDIX hydrolase | - |
| SCI_RS08585 (SCI_1682) | - | 1741437..1741907 (-) | 471 | WP_003037612.1 | DUF3013 family protein | - |
| SCI_RS08590 (SCI_1683) | rarA | 1742009..1743280 (+) | 1272 | WP_006268554.1 | replication-associated recombination protein A | Machinery gene |
| SCI_RS10360 (SCI_1685) | - | 1743847..1744360 (+) | 514 | Protein_1707 | DUF308 domain-containing protein | - |
| SCI_RS08605 (SCI_1686) | - | 1744431..1745080 (-) | 650 | Protein_1708 | HD domain-containing protein | - |
| SCI_RS08610 (SCI_1687) | - | 1745147..1745785 (-) | 639 | WP_003070721.1 | deoxynucleoside kinase | - |
| SCI_RS08615 (SCI_1688) | - | 1745972..1746739 (-) | 768 | WP_006268505.1 | epoxyqueuosine reductase QueH | - |
Sequence
Protein
Download Length: 423 a.a. Molecular weight: 46829.33 Da Isoelectric Point: 6.5107
>NTDB_id=50657 SCI_RS08590 WP_006268554.1 1742009..1743280(+) (rarA) [Streptococcus constellatus subsp. pharyngis C1050]
MPDNLAIRMRPKNINQVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLTNDDIKQAIQ
TALTDTERGFDFPVQLDDDALDFIATSTNGDLRSAFNSLDLAVLSTQADHAGVRHITLDIMENSLQKSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPDAQIHTVTALEAAQKIGFPEARILIANIV
IDLALSPKSNSAYVAIDKALSDLRQNGNLAIPRHLRDGHYVGSKELGNAQDYKYPHNYPGNWVKQDYLPEKIKYADYFIP
NENGKYERALGMTKNKIDQLKNN
MPDNLAIRMRPKNINQVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLTNDDIKQAIQ
TALTDTERGFDFPVQLDDDALDFIATSTNGDLRSAFNSLDLAVLSTQADHAGVRHITLDIMENSLQKSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPDAQIHTVTALEAAQKIGFPEARILIANIV
IDLALSPKSNSAYVAIDKALSDLRQNGNLAIPRHLRDGHYVGSKELGNAQDYKYPHNYPGNWVKQDYLPEKIKYADYFIP
NENGKYERALGMTKNKIDQLKNN
Nucleotide
Download Length: 1272 bp
>NTDB_id=50657 SCI_RS08590 WP_006268554.1 1742009..1743280(+) (rarA) [Streptococcus constellatus subsp. pharyngis C1050]
ATGCCAGACAATTTAGCGATTCGCATGCGGCCTAAAAATATCAATCAGGTCATCGGTCAGAAACATCTGGTCGGTGAAGG
AAAAATCATTCGTCGCATGGTGGAAGCCAATCGCCTGTCTTCCATGATTCTCTATGGTCCGCCAGGGATTGGCAAGACTT
CAATTGCTTCGGCTATTGCCGGAACTACCAAATTTGCTTTTCGGACCTTTAATGCTACTGTTGATAGTAAGAAGCGTCTG
CAAGAGATTGCGGAAGAAGCCAAATTCTCTGGTGGTTTGGTGCTGCTGTTAGACGAGATTCATCGCTTGGACAAGACCAA
ACAGGACTTCCTCCTACCGCTCTTGGAAAACGGTCTGGTCATCATGATTGGCGCCACAACAGAAAATCCCTTTTTCTCCG
TCACTCCCGCTATTCGCAGCCGAGTACAAATTTTCGAGTTGGAACCTCTGACAAATGATGATATTAAACAAGCCATTCAA
ACAGCCCTGACGGATACCGAACGAGGTTTTGATTTTCCTGTCCAGCTAGATGATGACGCTCTGGATTTCATTGCCACTTC
CACGAATGGAGATCTGCGCTCAGCCTTTAATTCTCTAGATTTAGCAGTTCTCTCTACCCAAGCGGATCATGCAGGTGTTC
GCCATATCACTCTGGATATTATGGAAAACAGCCTGCAAAAGAGCTACATCACTATGGACAAAGACGGAGACGGTCACTAT
GACGTCCTGTCCGCTTTACAGAAGTCTATTCGCGGGTCTGATGTCAATGCCAGTCTCCATTATGCAGCTCGCTTGATTGA
AGCTGGAGACCTTCCCAGTCTCGCACGACGCCTGACAGTCATTGCTTATGAAGACATTGGTTTGGCAAATCCCGATGCTC
AGATTCATACAGTGACCGCACTTGAAGCCGCTCAAAAAATTGGGTTCCCAGAAGCTCGCATCCTCATTGCCAACATTGTC
ATTGACCTAGCACTTTCTCCTAAGTCCAACTCGGCCTACGTAGCCATAGACAAAGCACTCTCTGACTTGCGCCAGAACGG
AAATCTCGCTATCCCCCGTCATCTACGAGACGGTCATTACGTCGGAAGCAAGGAGCTGGGAAATGCGCAGGATTACAAAT
ATCCACATAACTATCCTGGTAACTGGGTGAAACAAGATTATCTTCCTGAAAAAATAAAATATGCCGATTATTTCATTCCA
AATGAAAATGGAAAGTATGAACGAGCCCTTGGCATGACTAAAAATAAGATTGATCAATTAAAAAACAACTAA
ATGCCAGACAATTTAGCGATTCGCATGCGGCCTAAAAATATCAATCAGGTCATCGGTCAGAAACATCTGGTCGGTGAAGG
AAAAATCATTCGTCGCATGGTGGAAGCCAATCGCCTGTCTTCCATGATTCTCTATGGTCCGCCAGGGATTGGCAAGACTT
CAATTGCTTCGGCTATTGCCGGAACTACCAAATTTGCTTTTCGGACCTTTAATGCTACTGTTGATAGTAAGAAGCGTCTG
CAAGAGATTGCGGAAGAAGCCAAATTCTCTGGTGGTTTGGTGCTGCTGTTAGACGAGATTCATCGCTTGGACAAGACCAA
ACAGGACTTCCTCCTACCGCTCTTGGAAAACGGTCTGGTCATCATGATTGGCGCCACAACAGAAAATCCCTTTTTCTCCG
TCACTCCCGCTATTCGCAGCCGAGTACAAATTTTCGAGTTGGAACCTCTGACAAATGATGATATTAAACAAGCCATTCAA
ACAGCCCTGACGGATACCGAACGAGGTTTTGATTTTCCTGTCCAGCTAGATGATGACGCTCTGGATTTCATTGCCACTTC
CACGAATGGAGATCTGCGCTCAGCCTTTAATTCTCTAGATTTAGCAGTTCTCTCTACCCAAGCGGATCATGCAGGTGTTC
GCCATATCACTCTGGATATTATGGAAAACAGCCTGCAAAAGAGCTACATCACTATGGACAAAGACGGAGACGGTCACTAT
GACGTCCTGTCCGCTTTACAGAAGTCTATTCGCGGGTCTGATGTCAATGCCAGTCTCCATTATGCAGCTCGCTTGATTGA
AGCTGGAGACCTTCCCAGTCTCGCACGACGCCTGACAGTCATTGCTTATGAAGACATTGGTTTGGCAAATCCCGATGCTC
AGATTCATACAGTGACCGCACTTGAAGCCGCTCAAAAAATTGGGTTCCCAGAAGCTCGCATCCTCATTGCCAACATTGTC
ATTGACCTAGCACTTTCTCCTAAGTCCAACTCGGCCTACGTAGCCATAGACAAAGCACTCTCTGACTTGCGCCAGAACGG
AAATCTCGCTATCCCCCGTCATCTACGAGACGGTCATTACGTCGGAAGCAAGGAGCTGGGAAATGCGCAGGATTACAAAT
ATCCACATAACTATCCTGGTAACTGGGTGAAACAAGATTATCTTCCTGAAAAAATAAAATATGCCGATTATTTCATTCCA
AATGAAAATGGAAAGTATGAACGAGCCCTTGGCATGACTAAAAATAAGATTGATCAATTAAAAAACAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
59.809 |
98.818 |
0.591 |