Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | I2435_RS04985 | Genome accession | NZ_CP065059 |
| Coordinates | 990922..992151 (+) | Length | 409 a.a. |
| NCBI ID | WP_043053130.1 | Uniprot ID | A0A7Z8ZVZ1 |
| Organism | Streptococcus equi subsp. zooepidemicus strain SEZ25 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 958849..998412 | 990922..992151 | within | 0 |
Gene organization within MGE regions
Location: 958849..998412
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I2435_RS04835 (JFMEOBDD_00974) | - | 958849..959448 (+) | 600 | WP_043030869.1 | glycoside hydrolase family 73 protein | - |
| I2435_RS04840 (JFMEOBDD_00975) | - | 959535..960032 (+) | 498 | Protein_901 | DUF4368 domain-containing protein | - |
| I2435_RS04845 | - | 960093..960610 (+) | 518 | Protein_902 | ClbS/DfsB family four-helix bundle protein | - |
| I2435_RS04850 (JFMEOBDD_00977) | - | 960737..961003 (+) | 267 | WP_043030867.1 | DUF3847 domain-containing protein | - |
| I2435_RS04855 (JFMEOBDD_00978) | mobQ | 961298..962758 (+) | 1461 | WP_206156853.1 | MobQ family relaxase | - |
| I2435_RS04860 (JFMEOBDD_00979) | - | 962877..963293 (+) | 417 | WP_043983479.1 | hypothetical protein | - |
| I2435_RS04865 (JFMEOBDD_00980) | - | 963296..963499 (+) | 204 | WP_021675795.1 | helix-turn-helix transcriptional regulator | - |
| I2435_RS04870 (JFMEOBDD_00981) | - | 963938..964135 (+) | 198 | WP_012677866.1 | helix-turn-helix transcriptional regulator | - |
| I2435_RS04875 (JFMEOBDD_00982) | - | 964139..964582 (+) | 444 | WP_231196134.1 | hypothetical protein | - |
| I2435_RS04880 (JFMEOBDD_00983) | - | 964934..965647 (+) | 714 | WP_206156855.1 | glycoside hydrolase family 73 protein | - |
| I2435_RS04885 (JFMEOBDD_00984) | - | 965874..966254 (+) | 381 | WP_037580974.1 | DUF1149 family protein | - |
| I2435_RS04890 (JFMEOBDD_00985) | - | 966254..967102 (+) | 849 | WP_206156857.1 | DegV family protein | - |
| I2435_RS04895 (JFMEOBDD_00986) | - | 967202..968413 (+) | 1212 | WP_206156910.1 | CCA tRNA nucleotidyltransferase | - |
| I2435_RS04900 (JFMEOBDD_00987) | - | 968406..970274 (+) | 1869 | WP_206156859.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| I2435_RS04905 (JFMEOBDD_00988) | - | 970379..972124 (+) | 1746 | WP_111690164.1 | ABC transporter ATP-binding protein | - |
| I2435_RS04910 (JFMEOBDD_00989) | - | 972124..973896 (+) | 1773 | WP_206156861.1 | ABC transporter ATP-binding protein | - |
| I2435_RS04915 (JFMEOBDD_00990) | gdhA | 974037..975386 (+) | 1350 | WP_206156863.1 | NADP-specific glutamate dehydrogenase | - |
| I2435_RS04920 (JFMEOBDD_00991) | - | 975518..975928 (+) | 411 | WP_012677877.1 | peptide deformylase | - |
| I2435_RS04925 (JFMEOBDD_00992) | - | 976121..978127 (-) | 2007 | WP_206156865.1 | 5'-nucleotidase C-terminal domain-containing protein | - |
| I2435_RS04930 (JFMEOBDD_00993) | - | 978576..980297 (+) | 1722 | WP_043030849.1 | ABC transporter ATP-binding protein | - |
| I2435_RS04935 (JFMEOBDD_00994) | - | 980299..982050 (+) | 1752 | WP_206156867.1 | ABC transporter ATP-binding protein | - |
| I2435_RS04940 (JFMEOBDD_00995) | mvk | 982581..983459 (+) | 879 | WP_012515704.1 | mevalonate kinase | - |
| I2435_RS04945 (JFMEOBDD_00996) | mvaD | 983441..984385 (+) | 945 | WP_206156869.1 | diphosphomevalonate decarboxylase | - |
| I2435_RS04950 (JFMEOBDD_00997) | - | 984378..985376 (+) | 999 | WP_206152633.1 | phosphomevalonate kinase | - |
| I2435_RS04955 (JFMEOBDD_00998) | fni | 985379..986371 (+) | 993 | WP_165626053.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| I2435_RS04960 (JFMEOBDD_00999) | - | 986646..987929 (-) | 1284 | WP_042671129.1 | hydroxymethylglutaryl-CoA reductase, degradative | - |
| I2435_RS04965 (JFMEOBDD_01000) | - | 987916..989094 (-) | 1179 | WP_043040648.1 | hydroxymethylglutaryl-CoA synthase | - |
| I2435_RS04970 (JFMEOBDD_01001) | - | 989279..990118 (+) | 840 | WP_012515698.1 | thymidylate synthase | - |
| I2435_RS04975 (JFMEOBDD_01002) | - | 990199..990696 (+) | 498 | WP_041785524.1 | dihydrofolate reductase | - |
| I2435_RS04980 (JFMEOBDD_01003) | - | 990716..990886 (+) | 171 | WP_012515696.1 | hypothetical protein | - |
| I2435_RS04985 (JFMEOBDD_01004) | clpX | 990922..992151 (+) | 1230 | WP_043053130.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| I2435_RS04990 (JFMEOBDD_01005) | yihA | 992161..992760 (+) | 600 | WP_012677890.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| I2435_RS04995 (JFMEOBDD_01006) | - | 993124..996129 (+) | 3006 | WP_206156871.1 | leucine-rich repeat domain-containing protein | - |
| I2435_RS05000 (JFMEOBDD_01007) | - | 996319..998412 (-) | 2094 | WP_042670712.1 | ATP-dependent Clp protease ATP-binding subunit | - |
Sequence
Protein
Download Length: 409 a.a. Molecular weight: 45157.67 Da Isoelectric Point: 4.5698
>NTDB_id=506490 I2435_RS04985 WP_043053130.1 990922..992151(+) (clpX) [Streptococcus equi subsp. zooepidemicus strain SEZ25]
MAGNRSNDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLDILNQYVIGQER
AKRALSVAVYNHYKRISFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDDNASYMQEIIAEDIQKFGLIPEFIGRLPVVAALEQLNTEDLIRI
LTEPRNALVKQYQALLSYDGVELEFEKGALEAIAGRAIERKTGARGLRSIIEETMLDIMFEVPSQEEVTKVRITKEAVEG
QSKPVLEIA
MAGNRSNDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLDILNQYVIGQER
AKRALSVAVYNHYKRISFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDDNASYMQEIIAEDIQKFGLIPEFIGRLPVVAALEQLNTEDLIRI
LTEPRNALVKQYQALLSYDGVELEFEKGALEAIAGRAIERKTGARGLRSIIEETMLDIMFEVPSQEEVTKVRITKEAVEG
QSKPVLEIA
Nucleotide
Download Length: 1230 bp
>NTDB_id=506490 I2435_RS04985 WP_043053130.1 990922..992151(+) (clpX) [Streptococcus equi subsp. zooepidemicus strain SEZ25]
ATGGCAGGAAATCGTAGTAACGATATTAAGGTTCATTGCTCGTTTTGCGGCAAGAGCCAAGACGAAGTGAAAAAAATTAT
TGCAGGCAACAATGTCTTTATTTGTAATGAATGCGTTGCCTTGTCACAAGAAATCATCAAAGAAGAATTGGCAGAGGAGG
TTCTCGCTGATCTGACTGAGGTACCAAAGCCAAAAGAGCTCCTTGATATTTTAAATCAATACGTCATTGGTCAGGAGCGT
GCTAAGAGAGCCTTATCAGTTGCAGTTTATAATCATTACAAGAGGATTTCATTTACTGAGAGTCGTGACGATGATGATGT
GGATTTGCAAAAGTCAAACATTCTGATGATTGGACCAACAGGCTCAGGTAAGACCTTTTTAGCCCAGACTCTGGCTAAGA
GCCTTAATGTTCCATTTGCTATTGCTGATGCAACCTCTTTGACTGAAGCAGGCTATGTCGGAGAGGATGTGGAAAATATC
CTCCTGAAATTAATTCAAGCAGCTGATTACAATGTTGAGCGTGCAGAGCGCGGCATTATTTATGTTGACGAAATTGATAA
AATCGCTAAAAAAGGTGAGAATGTCTCCATTACTCGTGATGTATCAGGAGAAGGTGTCCAGCAAGCCTTGTTAAAAATTA
TTGAGGGAACGGTTGCTAGTGTTCCACCGCAAGGTGGTCGTAAGCACCCAAACCAAGAGATGATACAGATTGATACCAAA
AATATCTTGTTTATCGTCGGAGGCGCTTTTGATGGTATCGAAGAAATTGTCAAGCAGCGCTTGGGAGAAAAGATCATTGG
CTTTGGGCAAAATAGTCGAAAGATTGATGACAATGCTTCCTATATGCAGGAGATCATTGCTGAGGATATTCAAAAATTTG
GTCTGATTCCTGAATTTATTGGACGCTTGCCTGTTGTGGCAGCGCTTGAGCAGCTTAATACTGAGGATTTGATTCGTATT
TTAACAGAGCCTAGAAATGCCCTTGTGAAGCAATATCAAGCCTTGCTGTCATATGATGGCGTAGAGCTTGAGTTTGAAAA
GGGAGCTCTGGAAGCTATTGCAGGCAGAGCTATTGAGCGCAAGACTGGTGCGCGTGGTCTGAGGTCTATTATCGAAGAAA
CCATGCTGGATATCATGTTTGAGGTGCCAAGCCAAGAGGAAGTAACCAAGGTACGCATTACTAAGGAAGCTGTCGAGGGC
CAATCAAAGCCCGTTTTAGAGATAGCCTAG
ATGGCAGGAAATCGTAGTAACGATATTAAGGTTCATTGCTCGTTTTGCGGCAAGAGCCAAGACGAAGTGAAAAAAATTAT
TGCAGGCAACAATGTCTTTATTTGTAATGAATGCGTTGCCTTGTCACAAGAAATCATCAAAGAAGAATTGGCAGAGGAGG
TTCTCGCTGATCTGACTGAGGTACCAAAGCCAAAAGAGCTCCTTGATATTTTAAATCAATACGTCATTGGTCAGGAGCGT
GCTAAGAGAGCCTTATCAGTTGCAGTTTATAATCATTACAAGAGGATTTCATTTACTGAGAGTCGTGACGATGATGATGT
GGATTTGCAAAAGTCAAACATTCTGATGATTGGACCAACAGGCTCAGGTAAGACCTTTTTAGCCCAGACTCTGGCTAAGA
GCCTTAATGTTCCATTTGCTATTGCTGATGCAACCTCTTTGACTGAAGCAGGCTATGTCGGAGAGGATGTGGAAAATATC
CTCCTGAAATTAATTCAAGCAGCTGATTACAATGTTGAGCGTGCAGAGCGCGGCATTATTTATGTTGACGAAATTGATAA
AATCGCTAAAAAAGGTGAGAATGTCTCCATTACTCGTGATGTATCAGGAGAAGGTGTCCAGCAAGCCTTGTTAAAAATTA
TTGAGGGAACGGTTGCTAGTGTTCCACCGCAAGGTGGTCGTAAGCACCCAAACCAAGAGATGATACAGATTGATACCAAA
AATATCTTGTTTATCGTCGGAGGCGCTTTTGATGGTATCGAAGAAATTGTCAAGCAGCGCTTGGGAGAAAAGATCATTGG
CTTTGGGCAAAATAGTCGAAAGATTGATGACAATGCTTCCTATATGCAGGAGATCATTGCTGAGGATATTCAAAAATTTG
GTCTGATTCCTGAATTTATTGGACGCTTGCCTGTTGTGGCAGCGCTTGAGCAGCTTAATACTGAGGATTTGATTCGTATT
TTAACAGAGCCTAGAAATGCCCTTGTGAAGCAATATCAAGCCTTGCTGTCATATGATGGCGTAGAGCTTGAGTTTGAAAA
GGGAGCTCTGGAAGCTATTGCAGGCAGAGCTATTGAGCGCAAGACTGGTGCGCGTGGTCTGAGGTCTATTATCGAAGAAA
CCATGCTGGATATCATGTTTGAGGTGCCAAGCCAAGAGGAAGTAACCAAGGTACGCATTACTAAGGAAGCTGTCGAGGGC
CAATCAAAGCCCGTTTTAGAGATAGCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
88.753 |
100 |
0.888 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
59.102 |
98.044 |
0.579 |