Detailed information NTG0506408

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: I2434_RS01585
• Genome accession: NZ_CP065058
• Coordinates: 310550..311596 (+)
• Length: 348 a.a.
• NCBI ID: WP_021320348.1
• Uniprot ID: A0AAW3GP93
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ18
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 305550..316596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2434_RS01570 (MCPGFBBE_00310)	-	306758..308416 (+)	1659	WP_165623316.1	peptide ABC transporter substrate-binding protein	-
I2434_RS01575 (MCPGFBBE_00311)	-	308583..309497 (+)	915	WP_012514937.1	ABC transporter permease	-
I2434_RS01580 (MCPGFBBE_00312)	-	309507..310538 (+)	1032	WP_021320347.1	ABC transporter permease subunit	-
I2434_RS01585 (MCPGFBBE_00313)	oppD	310550..311596 (+)	1047	WP_021320348.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	Regulator
I2434_RS01590 (MCPGFBBE_00314)	amiF	311596..312531 (+)	936	WP_111677723.1	ATP-binding cassette domain-containing protein	Regulator
I2434_RS01595 (MCPGFBBE_00315)	rnjA	313122..314804 (-)	1683	WP_012514941.1	ribonuclease J1	-
I2434_RS01600 (MCPGFBBE_00316)	-	314806..315036 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
I2434_RS01605 (MCPGFBBE_00317)	tsaB	315322..316020 (+)	699	WP_165622647.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I2434_RS01610 (MCPGFBBE_00318)	rimI	316023..316448 (+)	426	WP_037583996.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38510.42 Da
• Isoelectric Point: 6.5059

>NTDB_id=506408 I2434_RS01585 WP_021320348.1 310550..311596(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain SEZ18]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGDICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQAQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPLPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=506408 I2434_RS01585 WP_021320348.1 310550..311596(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain SEZ18]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TGATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCGATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTGAATGCTAAGAATGCAAGTATTTCTGGAGACATTTGCTTCAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCCATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGACAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAACTGATGAAGGATATTCAGGCTCAGACCGCATCATCGATTATTTTTATTACAC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGCGTTGCTGTCATGTATGCTGGAAAGATTGTCGAATATGGAACGGTT
GACGAGGTATTTTATCATCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCTTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCGGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTACCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.827	99.713	0.796
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537