Detailed information NTG0506409

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: I2434_RS01590
• Genome accession: NZ_CP065058
• Coordinates: 311596..312531 (+)
• Length: 311 a.a.
• NCBI ID: WP_111677723.1
• Uniprot ID: A0AAX2LIV6
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ18
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 306596..317531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2434_RS01570 (MCPGFBBE_00310)	-	306758..308416 (+)	1659	WP_165623316.1	peptide ABC transporter substrate-binding protein	-
I2434_RS01575 (MCPGFBBE_00311)	-	308583..309497 (+)	915	WP_012514937.1	ABC transporter permease	-
I2434_RS01580 (MCPGFBBE_00312)	-	309507..310538 (+)	1032	WP_021320347.1	ABC transporter permease subunit	-
I2434_RS01585 (MCPGFBBE_00313)	oppD	310550..311596 (+)	1047	WP_021320348.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	Regulator
I2434_RS01590 (MCPGFBBE_00314)	amiF	311596..312531 (+)	936	WP_111677723.1	ATP-binding cassette domain-containing protein	Regulator
I2434_RS01595 (MCPGFBBE_00315)	rnjA	313122..314804 (-)	1683	WP_012514941.1	ribonuclease J1	-
I2434_RS01600 (MCPGFBBE_00316)	-	314806..315036 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
I2434_RS01605 (MCPGFBBE_00317)	tsaB	315322..316020 (+)	699	WP_165622647.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I2434_RS01610 (MCPGFBBE_00318)	rimI	316023..316448 (+)	426	WP_037583996.1	ribosomal protein S18-alanine N-acetyltransferase	-
I2434_RS01615 (MCPGFBBE_00319)	tsaD	316438..317454 (+)	1017	WP_012678539.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35071.16 Da
• Isoelectric Point: 7.6971

>NTDB_id=506409 I2434_RS01590 WP_111677723.1 311596..312531(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain SEZ18]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREARVQELLKLVGLNQDHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERKRIAEVYDPSQELDGQERQMHEITPGHFVLATQAEADQYRAERDL

Nucleotide

• Length: 936 bp

>NTDB_id=506409 I2434_RS01590 WP_111677723.1 311596..312531(+) (amiF) [Streptococcus equi subsp. zooepidemicus strain SEZ18]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAAGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAGGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACGA
CAGTTGGTCGAGCTATTTTGAAACTGTATGACATTAGTGATGGTGAGATTATCTTTAACGGAGAAAATGTCTCCCAATTA
AAAGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCACAAATGATCTTCCAAGATCCTCAGGCTAGTCTGAACGGCCGTAT
GAAAATTAGAGACATTGTTGCAGAGGGCTTAGACATTCATGGCTTGACAGCCTCAAAGGCAGAGCGTGAGGCAAGAGTCC
AGGAGCTGTTAAAGCTTGTTGGGCTCAATCAGGACCATTTGACGCGCTACCCACATGAATTTTCCGGTGGTCAACGCCAG
CGCATTGGCATTGCGCGTGCCTTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCGCTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTCATGCAGCAATTGCAAAAGAAGCGCGGCTTGACCTATCTCTTTATCGCTCACGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGCAAAATGCTTGAGATTGGAACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCTGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAA
GCGCATTGCAGAGGTTTATGATCCTAGTCAAGAGCTAGATGGCCAAGAGCGGCAAATGCATGAAATCACTCCTGGGCATT
TTGTCTTAGCGACGCAGGCCGAAGCCGATCAGTACCGAGCAGAGCGTGACCTCTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.248	98.392	0.534
amiF	Streptococcus thermophilus LMG 18311	53.922	98.392	0.531
amiF	Streptococcus salivarius strain HSISS4	53.595	98.392	0.527