Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I2433_RS10385 Genome accession   NZ_CP065056
Coordinates   2146590..2147363 (+) Length   257 a.a.
NCBI ID   WP_206152267.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ14     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2141590..2152363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2433_RS10365 (JDBNIEOD_02085) - 2142626..2144023 (-) 1398 WP_206152266.1 ISNCY-like element ISSeq2 family transposase -
  I2433_RS10375 (JDBNIEOD_02087) rlmH 2144553..2145032 (-) 480 WP_154804261.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I2433_RS10380 (JDBNIEOD_02088) htrA 2145242..2146465 (+) 1224 WP_012516520.1 trypsin-like peptidase domain-containing protein Regulator
  I2433_RS10385 (JDBNIEOD_02089) spo0J 2146590..2147363 (+) 774 WP_206152267.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29132.81 Da        Isoelectric Point: 9.8971

>NTDB_id=506396 I2433_RS10385 WP_206152267.1 2146590..2147363(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ14]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EMSALESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIKQAIEDSTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKAKHHPQKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQ
LSFSNQEELNRIINKLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=506396 I2433_RS10385 WP_206152267.1 2146590..2147363(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ14]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAGGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTGGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATGTCTGCTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTCATTGATAAAAATAAGATGACCCATGAGGACATCGCGACATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGGCTGCTGCAACTACCAGACGTTATTAAACAAGCGATTGAGGACAGTACCATTAGTGCTGGA
CATGCAAGAGCCTTATTATCCTTGTCAACACCAAAAGAGCAGGAGCTTTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAAGCTAAGCATCACCCCCAAAAAAGAAGCAAACATAAAACCATTTTTGTGAAGT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCAAAAAAAATGACAGTGGGCAGCTGCAG
CTATCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.328

99.611

0.611