Detailed information NTG0506287

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: I2432_RS01810
• Genome accession: NZ_CP065054
• Coordinates: 351095..352141 (+)
• Length: 348 a.a.
• NCBI ID: WP_012678544.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ13
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 346095..357141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2432_RS01795 (LJFMMFNO_00356)	-	347301..348959 (+)	1659	WP_206158965.1	peptide ABC transporter substrate-binding protein	-
I2432_RS01800 (LJFMMFNO_00357)	-	349127..350041 (+)	915	WP_115250569.1	ABC transporter permease	-
I2432_RS01805 (LJFMMFNO_00358)	-	350051..351082 (+)	1032	WP_012678545.1	ABC transporter permease	-
I2432_RS01810 (LJFMMFNO_00359)	oppD	351095..352141 (+)	1047	WP_012678544.1	ABC transporter ATP-binding protein	Regulator
I2432_RS01815 (LJFMMFNO_00360)	amiF	352141..353076 (+)	936	WP_012514940.1	ATP-binding cassette domain-containing protein	Regulator
I2432_RS01820 (LJFMMFNO_00361)	rnjA	353706..355388 (-)	1683	WP_012514941.1	ribonuclease J1	-
I2432_RS01825 (LJFMMFNO_00362)	-	355390..355620 (-)	231	WP_014622279.1	DNA-dependent RNA polymerase subunit epsilon	-
I2432_RS01830 (LJFMMFNO_00363)	tsaB	355905..356603 (+)	699	WP_206158966.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I2432_RS01835 (LJFMMFNO_00364)	rimI	356606..357031 (+)	426	WP_115250574.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38525.44 Da
• Isoelectric Point: 6.6666

>NTDB_id=506287 I2432_RS01810 WP_012678544.1 351095..352141(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
MTNETILSVKNLHVDFKTYAGDVKAIRNISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGDICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQSQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPLPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=506287 I2432_RS01810 WP_012678544.1 351095..352141(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain SEZ13]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTATGCTGGAGATGTTAAGGCGATTCG
TAATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCTATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTGAATGCTAAGAATGCAAGTATTTCTGGAGACATTTGCTTCAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCGATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGTATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATTCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCTCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGTCTCAGACCGCATCATCGATTATCTTTATTACGC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGCGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAGGTATTTTACCACCCACAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCTACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCATTACGCGGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTACCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.539	99.713	0.793
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537