Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   I6L25_RS05210 Genome accession   NZ_CP077398
Coordinates   1121178..1122671 (-) Length   497 a.a.
NCBI ID   WP_004708399.1    Uniprot ID   A0AA36NYD0
Organism   Acinetobacter nosocomialis strain FDAARGOS 1395     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1116178..1127671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L25_RS05185 (I6L25_05185) - 1117269..1117913 (-) 645 WP_004708391.1 hypothetical protein -
  I6L25_RS05190 (I6L25_05190) ispF 1118017..1118499 (+) 483 WP_002049661.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  I6L25_RS05195 (I6L25_05195) - 1118496..1119020 (-) 525 WP_004708393.1 protein tyrosine phosphatase family protein -
  I6L25_RS05200 (I6L25_05200) argF 1119214..1120134 (-) 921 WP_004708394.1 ornithine carbamoyltransferase -
  I6L25_RS05205 (I6L25_05205) adeN 1120248..1120901 (-) 654 WP_004708396.1 multidrug efflux transcriptional repressor AdeN -
  I6L25_RS05210 (I6L25_05210) luxO 1121178..1122671 (-) 1494 WP_004708399.1 nitrogen regulation protein NR(I) Regulator
  I6L25_RS05215 (I6L25_05215) glnL 1122658..1123767 (-) 1110 WP_002049598.1 nitrogen regulation protein NR(II) -
  I6L25_RS05225 (I6L25_05225) rimO 1124109..1125452 (+) 1344 WP_000856678.1 30S ribosomal protein S12 methylthiotransferase RimO -
  I6L25_RS05230 (I6L25_05230) pyrH 1125504..1126232 (+) 729 WP_000852257.1 UMP kinase -
  I6L25_RS05235 (I6L25_05235) frr 1126318..1126872 (+) 555 WP_002049637.1 ribosome recycling factor -
  I6L25_RS05240 (I6L25_05240) uppS 1126877..1127629 (+) 753 WP_004708401.1 polyprenyl diphosphate synthase -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 56250.08 Da        Isoelectric Point: 6.3154

>NTDB_id=506090 I6L25_RS05210 WP_004708399.1 1121178..1122671(-) (luxO) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHDAPDVILTDIRMPGIDGLTFLSKVKNSHPDLPVII
MTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLS
QSHITVLINGESGTGKELVAHALHKHSPRRAKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFL
DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDI
PMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQVPLQKNSEASQ
PAPSFERISLHHWDELLSQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMD
SADDDDEDEHKVTLSEA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=506090 I6L25_RS05210 WP_004708399.1 1121178..1122671(-) (luxO) [Acinetobacter nosocomialis strain FDAARGOS 1395]
GTGTCGCGAAATAAAATATGGGTTATTGATGACGATCGCGCCATGCGATGGGTACTTGAAAAGACCTTTAAAGAAGAAGG
ATTTGACGTCACCAATTTTGAAGAAGCTCAAACAGCACTCGAACGTTTACATCATGATGCACCGGATGTCATCTTAACTG
ACATCCGTATGCCAGGCATTGATGGGTTAACTTTCTTATCTAAAGTAAAAAACTCTCATCCTGATTTGCCTGTGATCATT
ATGACAGCGCATTCGGACTTAGAGTCTGCTGTATCTAGCTATCAAACTGGTGCATTTGAGTATTTACCAAAACCGTTTGA
TATTGATGAAGCTTTAGCTTTAGTCAATCGAGCAATTTTACATATCAATAAATTGCAGCAGCAAGAGGCTACAAAAACTG
CTTCTCCGCTACAATCGACAGAAATTATTGGTGAATCTCCGGCTATGCAAGAGGTTTTCCGAGCAATTGGTCGCTTATCT
CAGTCGCATATTACCGTTTTAATTAATGGTGAGTCAGGAACAGGTAAAGAATTAGTTGCACATGCTTTACATAAGCATTC
ACCACGCAGAGCCAAACCATTTATTGCTCTAAACATGGCAGCAATTCCGAAAGACTTAATTGAAACGGAATTATTTGGCC
ATGAAAAAGGTGCTTTTACTGGCGCTAATACTCAACACCAAGGTCGCTTTGAACAAGCCAATGGTGGCACTCTCTTCCTT
GATGAAATTGGTGACATGCCATTTGAAACACAGACGCGATTACTACGTGTACTCGCAGATGGTGAGTTTTACCGCGTTGG
CGGGCATATCCCTGTTAAAGTTGATGTTCGGATCGTAGCGGCAACACACCAAGATTTAGAAAAATTGGTAAATGAAGGTC
GCTTCCGTGAAGACTTATACCACCGTCTAAATGTAATTCGCATTCATATTCCTAAGCTTGCACATCGAAGTGAAGATATT
CCGATGTTAGCTCAACATTTCTTGGCTCGTGCTGGTAAAGAGTTAGGCGTAAGTCCAAAGATTTTACGTACCGAGACAAC
TGACTATATGCAGCAATTACCATGGCCCGGTAATGTTCGTCAGCTTGAAAATACCTGCCGCTGGTTAACCGTTATGATTA
CTGGCCGTGAGGTTTATCCAGAAGATTTACCTTCAGAACTTAAACAAGTTCCACTCCAAAAAAATAGTGAAGCTAGCCAA
CCTGCTCCATCTTTTGAGCGTATTTCTTTACATCATTGGGATGAGCTACTAAGTCAATGGGCAATTCAAAAACTCAAAAA
TGGCGAAATGAAGATTTTGGATATTGCTACACCAATGTTTGAGCGCACTTTAATTAATGCTGCACTACAGCAAACTCGTG
GGCGCAAACGTCATGCAGCTGAGCTATTAGGTTGGGGCCGTAACACTCTAACCCGAAAGTTAAAAGAACTAGGTATGGAT
TCTGCTGATGACGATGATGAGGATGAACACAAAGTAACTTTGTCTGAAGCTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory protein, Fis family (HTH_8)

(439-477)

Response regulator receiver domain (Response_reg)

(6-115)

Sigma-54 interaction domain (Sigma54_activat)

(142-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36NYD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

40.402

90.141

0.364
  pilR Pseudomonas aeruginosa PAK

37.5

96.579

0.362