Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   I1A55_RS06920 Genome accession   NZ_CP065040
Coordinates   1364031..1364612 (+) Length   193 a.a.
NCBI ID   WP_017367156.1    Uniprot ID   A0AB39J8T9
Organism   Bacillus altitudinis strain Ba1449     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1359031..1369612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I1A55_RS06895 - 1359697..1360875 (+) 1179 WP_051005660.1 N-acetyldiaminopimelate deacetylase -
  I1A55_RS06900 - 1360926..1361168 (+) 243 WP_003211408.1 YkuS family protein -
  I1A55_RS06905 - 1361191..1362000 (-) 810 WP_017367155.1 mechanosensitive ion channel family protein -
  I1A55_RS06910 ahpA 1362272..1362814 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  I1A55_RS06915 - 1363091..1363549 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  I1A55_RS06920 rok 1364031..1364612 (+) 582 WP_017367156.1 hypothetical protein Regulator
  I1A55_RS06925 - 1364675..1365592 (-) 918 WP_017367157.1 hypothetical protein -
  I1A55_RS06930 - 1365676..1366257 (+) 582 WP_017367158.1 molybdenum cofactor guanylyltransferase -
  I1A55_RS06935 - 1366287..1367303 (+) 1017 WP_041092414.1 MoeB/ThiF family adenylyltransferase -
  I1A55_RS06940 glp 1367313..1368587 (+) 1275 WP_206114312.1 gephyrin-like molybdotransferase Glp -
  I1A55_RS06945 - 1368569..1369096 (+) 528 WP_206114313.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB -
  I1A55_RS06950 - 1369089..1369580 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21875.86 Da        Isoelectric Point: 9.7309

>NTDB_id=506090 I1A55_RS06920 WP_017367156.1 1364031..1364612(+) (rok) [Bacillus altitudinis strain Ba1449]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=506090 I1A55_RS06920 WP_017367156.1 1364031..1364612(+) (rok) [Bacillus altitudinis strain Ba1449]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACCAGCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGTTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

80

98.446

0.788