Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MY9_RS04790 Genome accession   NC_017743
Coordinates   978436..979227 (+) Length   263 a.a.
NCBI ID   WP_014663264.1    Uniprot ID   -
Organism   Bacillus sp. JS     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 973436..984227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MY9_RS04760 (MY9_0934) - 974276..975307 (+) 1032 WP_014663259.1 iron ABC transporter permease -
  MY9_RS04765 (MY9_0935) - 975422..976303 (+) 882 WP_014663260.1 PhzF family phenazine biosynthesis isomerase -
  MY9_RS04770 (MY9_0936) - 976391..976975 (+) 585 WP_014663261.1 nitroreductase -
  MY9_RS04775 (MY9_0937) - 977013..977204 (-) 192 WP_014663262.1 YfhD family protein -
  MY9_RS04780 (MY9_0938) - 977271..977381 (-) 111 WP_003223230.1 YfhE family protein -
  MY9_RS04785 (MY9_0939) - 977436..978347 (-) 912 WP_014663263.1 TIGR01777 family oxidoreductase -
  MY9_RS04790 (MY9_0940) recX 978436..979227 (+) 792 WP_014663264.1 recombination regulator RecX Regulator
  MY9_RS04795 (MY9_0941) - 979236..979550 (+) 315 WP_014663265.1 YfhH family protein -
  MY9_RS04800 (MY9_0942) - 979696..980889 (+) 1194 WP_014663266.1 MFS transporter -
  MY9_RS04805 (MY9_0943) - 980921..981073 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  MY9_RS04810 (MY9_0944) - 981199..981468 (+) 270 WP_014663267.1 YfhJ family protein -
  MY9_RS04815 (MY9_0946) - 981587..982105 (+) 519 WP_014663269.1 SH3 domain-containing protein -
  MY9_RS04820 (MY9_0947) - 982189..982521 (+) 333 WP_014663270.1 SdpI family protein -
  MY9_RS04825 (MY9_0948) ephM 982508..983368 (+) 861 WP_014663271.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30862.11 Da        Isoelectric Point: 7.0000

>NTDB_id=50583 MY9_RS04790 WP_014663264.1 978436..979227(+) (recX) [Bacillus sp. JS]
MPFITKISAQKKNTERFNIFLNDKYAFSVDADVLVKYELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVINAALEQIEYENDEDTEKEALRIQAEKALRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLHEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=50583 MY9_RS04790 WP_014663264.1 978436..979227(+) (recX) [Bacillus sp. JS]
ATGCCGTTTATTACAAAAATATCAGCGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGAATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTTGTGAAATATGAGCTCAAGAAGGGAAAAGAACTTGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGCGCGCTTGAATTTTTATCCTATCGAATGCGGTCAACGAAAGAGGTC
GAGGACCACTTGAAGAAAAAAGAAACCTCGCCACCCGTCATTGCGGAGGTCATCCATAAGCTCAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACCCACAAAAAAACAAACGGAAAAGGACCTGATGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCTTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAAGGCTTCTCATTTGATGTCATCAATGCGGCGCTAGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCATTCAAGCAGAAAAAGCGCTTAGAAAATACCGCTATGACGGCTCCTATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAACAATTTCTGCACGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

94.677

100

0.947

Multiple sequence alignment