Detailed information NTG0050579

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MY9_RS02150
• Genome accession: NC_017743
• Coordinates: 424477..425625 (+)
• Length: 382 a.a.
• NCBI ID: WP_014662770.1
• Uniprot ID: A0A292GMY1
• Organism: Bacillus sp. JS
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 419477..430625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MY9_RS02130 (MY9_0389)	-	419839..420519 (-)	681	WP_014662766.1	ABC transporter ATP-binding protein	-
MY9_RS02135 (MY9_0390)	-	420535..422010 (-)	1476	WP_014662767.1	ABC transporter permease	-
MY9_RS02140 (MY9_0391)	yclJ	422223..422906 (+)	684	WP_041521471.1	two-component system response regulator YclJ	-
MY9_RS02145 (MY9_0392)	yclK	422893..424314 (+)	1422	WP_081483592.1	two-component system sensor histidine kinase YclK	-
MY9_RS02150 (MY9_0393)	rapC	424477..425625 (+)	1149	WP_014662770.1	response regulator aspartate phosphatase RapC	Regulator
MY9_RS02155 (MY9_0394)	phrC	425609..425731 (+)	123	WP_014662771.1	phosphatase RapC inhibitor PhrC	Regulator
MY9_RS02160	-	425829..425939 (-)	111	WP_040084173.1	YjcZ family sporulation protein	-
MY9_RS02165 (MY9_0395)	-	426082..427446 (-)	1365	WP_014662772.1	aspartate kinase	-
MY9_RS02170 (MY9_0396)	ceuB	427831..428781 (+)	951	WP_014662773.1	petrobactin ABC transporter permease YclN	Machinery gene
MY9_RS02175 (MY9_0397)	yclO	428774..429721 (+)	948	WP_014662774.1	petrobactin ABC transporter permease YclO	-
MY9_RS02180 (MY9_0398)	yclP	429715..430473 (+)	759	WP_014662775.1	petrobactin ABC transporter ATP-binding protein YclP	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45622.66 Da
• Isoelectric Point: 4.9649

>NTDB_id=50579 MY9_RS02150 WP_014662770.1 424477..425625(+) (rapC) [Bacillus sp. JS]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDILD
PAIEYFEKAVSTFESSRIINSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPSEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=50579 MY9_RS02150 WP_014662770.1 424477..425625(+) (rapC) [Bacillus sp. JS]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAAAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCACGAAACATTGACAGCAATCAGGCAGATCTTAAAGGGCTGCTCGACTATTACGTGAATTTTTT
CCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAACTTTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTACTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATCAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTTAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGATATTCTTGAC
CCTGCCATTGAGTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCATCAATTCTCTGCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAGTGAAGAAGGA
ATCGAACGATGTTTTCAATACCTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAGTGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: A0A292GMY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	98.429	100	0.984
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568